RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 A0A1W2PPB8 328 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 A0A1W2PRS3 328 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 SYNDIG1LA6NDD5 238 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 HSPB2A8KAH6 182 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 FAM171A2A8MVW0 826 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 KIR3DP1A8MWS1 328 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 GOSR1O95249 250 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 CH25HO95992 272 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 LALBAP00709 142 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 HEXAP06865 529 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 SMIM10L1P0DMW3 83 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 GABRA1P14867 456 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 FUT1P19526 365 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 CSNK2A2P19784 350 aaPredicted RBP7.44□□□□□ -1.22
NEDD8-207ENST00000533242 UQCRC1P31930 480 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 GSTM5P46439 218 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 ASCL1P50553 236 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 MXD1Q05195 221 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 PRKCDQ05655 676 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 MADCAM1Q13477 382 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 HSPB2Q16082 182 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 OCLNQ16625 522 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 FBXL19-AS1Q494R0 122 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 ENTPD8Q5MY95 495 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 CLEC9AQ6UXN8 241 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 CD300LDQ6UXZ3 194 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 ZFP41Q8N8Y5 198 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 ZBTB8BQ8NAP8 495 aaPredicted RBP7.44□□□□□ -1.22
NEDD8-207ENST00000533242 WFDC11Q8NEX6 87 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 OR4Q3Q8NH05 313 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 GPR151Q8TDV0 419 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 RASSF5Q8WWW0 418 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 HPS1Q92902 700 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 CDS1Q92903 461 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 RNASE6Q93091 150 aaKnown RBP7.44□□□□□ -1.22
NEDD8-207ENST00000533242 SMIM10Q96HG1 83 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 PNO1Q9NRX1 252 aaKnown RBP7.44□□□□□ -1.22
NEDD8-207ENST00000533242 SNTG1Q9NSN8 517 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 GIMAP4Q9NUV9 329 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 NDUFB11Q9NX14 153 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 CHCHD3Q9NX63 227 aaKnown RBP7.44□□□□□ -1.22
NEDD8-207ENST00000533242 A3GALT2U3KPV4 340 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 NCKAP5O14513 1909 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 ABCA4P78363 2273 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 CDC42EP2O14613 210 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 EMC8O43402 210 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 PRKNO60260 465 aaPredicted RBP7.43□□□□□ -1.22
NEDD8-207ENST00000533242 HCN1O60741 890 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 CYP7B1O75881 506 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 OR2J2O76002 312 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 SLC2A10O95528 541 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 ENDOUP21128 410 aaKnown RBP7.43□□□□□ -1.22
NEDD8-207ENST00000533242 TNFSF8P32971 234 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 GPR4P46093 362 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 OMPP47874 163 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 EIF2B2P49770 351 aaKnown RBP7.43□□□□□ -1.22
NEDD8-207ENST00000533242 SELENBP1Q13228 472 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 SNTB1Q13884 538 aaKnown RBP7.43□□□□□ -1.22
NEDD8-207ENST00000533242 RUNX2Q13950 521 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 INSL4Q14641 139 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 SNAPC1Q16533 368 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 DESI1Q6ICB0 168 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 SLC30A6Q6NXT4 461 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 IL20RBQ6UXL0 311 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 B3GLCTQ6Y288 498 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 FRRS1Q6ZNA5 592 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 Q71RC1 249 aaPredicted RBP7.43□□□□□ -1.22
NEDD8-207ENST00000533242 GDPD3Q7L5L3 318 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 LAX1Q8IWV1 398 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 CELF2-AS1Q8N7Q2 184 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 TMEM52Q8NDY8 209 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 BBS1Q8NFJ9 593 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 SFXN5Q8TD22 340 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 TMEM255BQ8WV15 326 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 SLC9A6Q92581 669 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 ARHGDIGQ99819 225 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 SMR3AQ99954 134 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 PINK1Q9BXM7 581 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 SAP130Q9H0E3 1048 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 ADAP2Q9NPF8 381 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 RYDENQ9NUL5 291 aaKnown RBP7.43□□□□□ -1.22
NEDD8-207ENST00000533242 FBXO34Q9NWN3 711 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 FOXD3Q9UJU5 478 aaPredicted RBP7.43□□□□□ -1.22
NEDD8-207ENST00000533242 LIPT1Q9Y234 373 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 RPL36Q9Y3U8 105 aaKnown RBP7.43□□□□□ -1.22
NEDD8-207ENST00000533242 A0A0G2JPF8 293 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 HNRNPCL2B2RXH8 293 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 HNRNPCL3B7ZW38 293 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 HNRNPCL4P0DMR1 293 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 NR2F6P10588 404 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 PRG2P13727 222 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 HOXC12P31275 282 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 SSTR4P31391 388 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 S100A5P33763 92 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 MPIP34949 423 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 MAGEA5P43359 124 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 HSD17B7P56937 341 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 TAS2R41P59536 307 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 PLAURQ03405 335 aa7.43□□□□□ -1.22
NEDD8-207ENST00000533242 SLC10A1Q14973 349 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms