RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 HINT3Q9NQE9 182 aaKnown RBP16.7■□□□□ 0.26
SMPD1-208ENST00000533123 OSGIN1Q9UJX0 560 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 PCDHGA9Q9Y5G4 932 aaKnown RBP16.7■□□□□ 0.26
SMPD1-208ENST00000533123 ACACBO00763 2458 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 M0R082 166 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 CBR3O75828 277 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 PPP1R3DO95685 299 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 PDGFAP04085 211 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 PNMTP11086 282 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 LIPAP38571 399 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 PLPPR5Q32ZL2 321 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 AADACL4Q5VUY2 407 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 RPL13AP3Q6NVV1 102 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 SLC46A3Q7Z3Q1 461 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 LNX2Q8N448 690 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 ZBTB8BQ8NAP8 495 aaPredicted RBP16.69■□□□□ 0.26
SMPD1-208ENST00000533123 RAB2BQ8WUD1 216 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 TMEM234Q8WY98 164 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 BORCS5Q969J3 196 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 OTULINQ96BN8 352 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 TMEM80Q96HE8 168 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 OR5M11Q96RB7 305 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 ENPP5Q9UJA9 477 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 KLF13Q9Y2Y9 288 aaPredicted RBP16.69■□□□□ 0.26
SMPD1-208ENST00000533123 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 K7EM74 188 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 HMGN1P05114 100 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 DPP4P27487 766 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 SLC9A3P48764 834 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 EGR4Q05215 589 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 TIGD6Q17RP2 521 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 SHFQ7M4L6 423 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 GRINAQ7Z429 371 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 IGFN1Q86VF2 1251 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 CPOQ8IVL8 374 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 OR52I1Q8NGK6 324 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 OR5M1Q8NGP8 315 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 ST8SIA1Q92185 356 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 LGALS12Q96DT0 336 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 RNFT2Q96EX2 444 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 SCMH1Q96GD3 660 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 MED20Q9H944 212 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 ZFP64Q9NPA5 681 aa16.69■□□□□ 0.26
SMPD1-208ENST00000533123 SPENQ96T58 3664 aaKnown RBP16.68■□□□□ 0.26
SMPD1-208ENST00000533123 MKRN2OSH3BPM6 223 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 TGFBR2P37173 567 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 CDH11P55287 796 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 FOXK2Q01167 660 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 FOXF1Q12946 379 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 CBX3Q13185 183 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 AQP6Q13520 282 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 TOMM20Q15388 145 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 PLBD1Q6P4A8 553 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 PAQR6Q6TCH4 344 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 ANKRD13BQ86YJ7 626 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 RELTQ969Z4 430 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 TAPBPLQ9BX59 468 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 BOKQ9UMX3 212 aaPredicted RBP16.68■□□□□ 0.26
SMPD1-208ENST00000533123 RPH3AQ9Y2J0 694 aaPredicted RBP16.68■□□□□ 0.26
SMPD1-208ENST00000533123 MAP1BP46821 2468 aaKnown RBP16.68■□□□□ 0.26
SMPD1-208ENST00000533123 NCKAP5O14513 1909 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 HSMCR30P0CW71 290 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 GRK5P34947 590 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 DSCR4P56555 118 aaPredicted RBP16.68■□□□□ 0.26
SMPD1-208ENST00000533123 CTF1Q16619 201 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.68■□□□□ 0.26
SMPD1-208ENST00000533123 ZADH2Q8N4Q0 377 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 DNAJA3Q96EY1 480 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 ABHD17AQ96GS6 310 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 CRELD1Q96HD1 420 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 COX4I2Q96KJ9 171 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 MOGAT1Q96PD6 335 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 HCAR1Q9BXC0 346 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 SLC19A3Q9BZV2 496 aa16.68■□□□□ 0.26
SMPD1-208ENST00000533123 KLRC4-KLRK1H3BQV0 150 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 OR7A10O76100 309 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 CXCR1P25024 350 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 MTNR1AP48039 350 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 MEOX1P50221 254 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 POLR2HP52434 150 aaKnown RBP16.67■□□□□ 0.26
SMPD1-208ENST00000533123 MED22Q15528 200 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 ADGRG3Q86Y34 549 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 TMEM178AQ8NBL3 297 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 POC1BQ8TC44 478 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 TM9SF4Q92544 642 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 KTI12Q96EK9 354 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-208ENST00000533123 TMEM43Q9BTV4 400 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 DKKL1Q9UK85 242 aa16.67■□□□□ 0.26
SMPD1-208ENST00000533123 ZC3H12DA2A288 527 aaKnown RBP16.66■□□□□ 0.26
SMPD1-208ENST00000533123 FAM47E-STBD1D6RA91 191 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 MCIDASD6RGH6 385 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 ZIC3O60481 467 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 CD36P16671 472 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 LSM3P62310 102 aaKnown RBP16.66■□□□□ 0.26
SMPD1-208ENST00000533123 IGFL3Q6UXB1 125 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 B3GLCTQ6Y288 498 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 CXXC5Q7LFL8 322 aaKnown RBP16.66■□□□□ 0.26
SMPD1-208ENST00000533123 P2RY8Q86VZ1 359 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 C10orf53Q8N6V4 93 aa16.66■□□□□ 0.26
SMPD1-208ENST00000533123 C9orf43Q8TAL5 461 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms