RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 HACD2Q6Y1H2 254 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 SPNS3Q6ZMD2 512 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 CCDC121Q6ZUS5 278 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 TSPYL5Q86VY4 417 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-210ENST00000532935 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 CARM1Q86X55 608 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 EPHX4Q8IUS5 362 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 SLC15A3Q8IY34 581 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 ZNF417Q8TAU3 575 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 ADAMTS16Q8TE57 1224 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 CMTM5Q96DZ9 223 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 ZNF587Q96SQ5 575 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-210ENST00000532935 SLCO5A1Q9H2Y9 848 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 UBTD1Q9HAC8 227 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 NGBQ9NPG2 151 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 B3GALT5Q9Y2C3 310 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 SH3GLB1Q9Y371 365 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 TRAPPC13A5PLN9 417 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 OR5H1A6NKK0 313 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 LYPD3O95274 346 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 PLAUP00749 431 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 BGLAPP02818 100 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 THY1P04216 161 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 ZNF43P17038 809 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 CD53P19397 219 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 TNFRSF1BP20333 461 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 CBLP22681 906 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 NUDT2P50583 147 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 SLC7A2P52569 658 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 LIPEQ05469 1076 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 LTBQ06643 244 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 LRRC23Q53EV4 343 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-210ENST00000532935 CYBRD1Q53TN4 286 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 WDR88Q6ZMY6 472 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 ZNF704Q6ZNC4 412 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-210ENST00000532935 H1FNTQ75WM6 255 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-210ENST00000532935 POMGNT2Q8NAT1 580 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 ADPRHL1Q8NDY3 354 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 MUCL1Q96DR8 90 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 OXGR1Q96P68 337 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 LRRC37BQ96QE4 947 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 TMEM204Q9BSN7 226 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 CXXC4Q9H2H0 198 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 GMPR2Q9P2T1 348 aaKnown RBP13.53□□□□□ -0.24
CPSF1-210ENST00000532935 B3GAT1Q9P2W7 334 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 SLC7A7Q9UM01 511 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 CORINQ9Y5Q5 1042 aa13.53□□□□□ -0.24
CPSF1-210ENST00000532935 ALPK2Q86TB3 2170 aa13.52□□□□□ -0.24
CPSF1-210ENST00000532935 NME4O00746 187 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 ATP5HO75947 161 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 MPGP29372 298 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 PRDX6P30041 224 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 SELENOPP49908 381 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 GABRA6Q16445 453 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 ACKR1Q16570 336 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 NCMAPQ5T1S8 102 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 C9orf135Q5VTT2 229 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 OR7E24Q6IFN5 339 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 NIPAL3Q6P499 406 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 SSX8Q7RTT4 187 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 C10orf53Q8N6V4 93 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 SCAIQ8N9R8 606 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 SLC41A3Q96GZ6 507 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 MPP4Q96JB8 637 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 MUS81Q96NY9 551 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 MOGAT1Q96PD6 335 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 ALPK1Q96QP1 1244 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 ASPNQ9BXN1 380 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 AMBRA1Q9C0C7 1298 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 ESRP2Q9H6T0 727 aaKnown RBP13.52□□□□□ -0.25
CPSF1-210ENST00000532935 ARID1AO14497 2285 aa13.52□□□□□ -0.25
CPSF1-210ENST00000532935 LOC102725191A0A1B0GVB3 256 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 LRRN3E7EW58 273 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 MS4A18H0YCH9 400 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 KRT33AO76009 404 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 CD3EP07766 207 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 NQO1P15559 274 aaKnown RBP13.51□□□□□ -0.25
CPSF1-210ENST00000532935 CLDN17P56750 224 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 IL1RL1Q01638 556 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 TGFBR3Q03167 851 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 LGALS3BPQ08380 585 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 C1DQ13901 141 aaKnown RBP13.51□□□□□ -0.25
CPSF1-210ENST00000532935 MS4A18Q3C1V0 323 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 TTC33Q6PID6 262 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-210ENST00000532935 C20orf204Q6ZNR8 217 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 ABHD12BQ7Z5M8 362 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-210ENST00000532935 C1orf162Q8NEQ5 155 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-210ENST00000532935 OR52N5Q8NH56 324 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 TPD52L3Q96J77 140 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 ALG2Q9H553 416 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 MRPL39Q9NYK5 338 aaKnown RBP13.51□□□□□ -0.25
CPSF1-210ENST00000532935 RCE1Q9Y256 329 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 RNF115Q9Y4L5 304 aa13.51□□□□□ -0.25
CPSF1-210ENST00000532935 PLCE1Q9P212 2302 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 DPRXA6NFQ7 191 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 OR6C65A6NJZ3 312 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 TRAF3IP2O43734 574 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-210ENST00000532935 ZNF432O94892 652 aa13.5□□□□□ -0.25
CPSF1-210ENST00000532935 HPRP00739 348 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms