RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	VTCN1	Q7Z7D3	282 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	RBM45	Q8IUH3	476 aa	Known RBP	7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	LSMEM1	Q8N8F7	131 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	WFDC11	Q8NEX6	87 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	FNDC9	Q8TBE3	224 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	FAM222B	Q8WU58	562 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	LZIC	Q8WZA0	190 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	CPNE4	Q96A23	557 aa	Predicted RBP	7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	DDIT4L	Q96D03	193 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	ARL5B	Q96KC2	179 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	MCHR1	Q99705	422 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	PRRG4	Q9BZD6	226 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	TRIM2	Q9C040	744 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	PCDHAC1	Q9H158	963 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	C1orf21	Q9H246	121 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	TMEM27	Q9HBJ8	222 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	PAQR5	Q9NXK6	330 aa	Predicted RBP	7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	TAS2R1	Q9NYW7	299 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	PRR13	Q9NZ81	148 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	SELENON	Q9NZV5	590 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	RPS6KA6	Q9UK32	745 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	MCTS1	Q9ULC4	181 aa	Known RBP	7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	PRPF19	Q9UMS4	504 aa	Known RBP	7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	ZNF175	Q9Y473	711 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	SNX13	Q9Y5W8	968 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678		V9GYQ6	96 aa		7.17	□□□□□ -1.26
PUM1-223	ENST00000532678	IGHV3-15	A0A0B4J1V0	119 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	TUBAL3	A6NHL2	446 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	SULT2B1	O00204	365 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	GMNN	O75496	209 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	AQP8	O94778	261 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	SYNGR4	O95473	234 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	PNMT	P11086	282 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	ATF4	P18848	351 aa	Predicted RBP	7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	PTN	P21246	168 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	ATP6V1B2	P21281	511 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	CTSS	P25774	331 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	IDUA	P35475	653 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	TIMP3	P35625	211 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	DIO1	P49895	249 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	CARD18	P57730	90 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	SELENOW	P63302	87 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	CSNK2A1	P68400	391 aa	Predicted RBP	7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	ADAM8	P78325	824 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	BNIP1	Q12981	228 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	DNAL1	Q4LDG9	190 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	IFI44L	Q53G44	452 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	ENTPD8	Q5MY95	495 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	ZNF613	Q6PF04	617 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	ULK3	Q6PHR2	472 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	FKBP9P1	Q75LS8	142 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	KRTAP1-3	Q8IUG1	177 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	ARHGAP24	Q8N264	748 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	FAM86B1	Q8N7N1	296 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	ADAMTS16	Q8TE57	1224 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	RNF128	Q8TEB7	428 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	DNAJA4	Q8WW22	397 aa	Predicted RBP	7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	GEMIN6	Q8WXD5	167 aa	Known RBP	7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	ROBO4	Q8WZ75	1007 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	OSTF1	Q92882	214 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	INTS12	Q96CB8	462 aa	Known RBP	7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	CCDC124	Q96CT7	223 aa	Known RBP	7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	CLPTM1L	Q96KA5	538 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	NSMCE2	Q96MF7	247 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	ZFP3	Q96NJ6	502 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	THTPA	Q9BU02	230 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	RBM24	Q9BX46	236 aa	Known RBP	7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	C12orf10	Q9HB07	376 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	TIGAR	Q9NQ88	270 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	DLL4	Q9NR61	685 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	GALNT8	Q9NY28	637 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	PRDM4	Q9UKN5	801 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	SLC7A7	Q9UM01	511 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	SAMD4A	Q9UPU9	718 aa	Known RBP	7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	HDGFL3	Q9Y3E1	203 aa		7.16	□□□□□ -1.26
PUM1-223	ENST00000532678	IGKV1D-42	A0A075B6H8	117 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	TRAPPC13	A5PLN9	417 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678		A8MVM7	634 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678		H3BS24	57 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	SMAD9	O15198	467 aa	Known RBP	7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	GYG2	O15488	501 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	CHP2	O43745	196 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	RCBTB2	O95199	551 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	AHSA1	O95433	338 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	PMS2P2	O95744	297 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	PLG	P00747	810 aa	Predicted RBP	7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	RAF1	P04049	648 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	HRG	P04196	525 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	THY1	P04216	161 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	IFNW1	P05000	195 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	ENPP1	P22413	925 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	FKBP2	P26885	142 aa	Known RBP	7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	CLK1	P49759	484 aa	Known RBP	7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	MAP2K6	P52564	334 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	CDH12	P55289	794 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	OR2B6	P58173	313 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	TAS2R41	P59536	307 aa		7.15	□□□□□ -1.26
PUM1-223	ENST00000532678	RAC3	P60763	192 aa		7.15	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms