RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 MNAT1P51948 309 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 UGT2B15P54855 530 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 ITGADQ13349 1161 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 ZNF74Q16587 644 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 SPATS1Q496A3 300 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 IFI44LQ53G44 452 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 SAMD4BQ5PRF9 694 aaKnown RBP12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 TTC33Q6PID6 262 aaPredicted RBP12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 C16orf89Q6UX73 402 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 SLC46A3Q7Z3Q1 461 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 WDFY1Q8IWB7 410 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 ZNF100Q8IYN0 542 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 ZNF433Q8N7K0 673 aaPredicted RBP12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 SCAIQ8N9R8 606 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 RNF217Q8TC41 542 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 LZICQ8WZA0 190 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 APH1AQ96BI3 265 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 HSH2DQ96JZ2 352 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 PRRC1Q96M27 445 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 OXGR1Q96P68 337 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 EPYCQ99645 322 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 HDHD5Q9BXW7 423 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 SLC19A3Q9BZV2 496 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 SLC7A10Q9NS82 523 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 MRPL39Q9NYK5 338 aaKnown RBP12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 MALT1Q9UDY8 824 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 CORINQ9Y5Q5 1042 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 CADP27708 2225 aa12.3□□□□□ -0.44
TSPAN4-220ENST00000532375 ROS1P08922 2347 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 PLPP3O14495 311 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 TRAF3IP2O43734 574 aaPredicted RBP12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 MT-ATP6P00846 226 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 IGF2P01344 180 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 ASAH2BP0C7U1 165 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 HLA-DOBP13765 273 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 TCN1P20061 433 aaPredicted RBP12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 RBM34P42696 430 aaKnown RBP12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 YAP1P46937 504 aaKnown RBP12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 TAS2R41P59536 307 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 MFSD13AQ14CX5 517 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 LINGO2Q7L985 606 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 AAED1Q7RTV5 226 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 TRPM8Q7Z2W7 1104 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 GPAT4Q86UL3 456 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 LRRC17Q8N6Y2 441 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 TMEM255BQ8WV15 326 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 LIPHQ8WWY8 451 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 GEMIN6Q8WXD5 167 aaKnown RBP12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 FAM162AQ96A26 154 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 S100PBPQ96BU1 408 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 ACTR6Q9GZN1 396 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 C20orf141Q9NUB4 165 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 PARPBPQ9NWS1 579 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 NDE1Q9NXR1 346 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 TAS2R5Q9NYW4 299 aa12.29□□□□□ -0.44
TSPAN4-220ENST00000532375 ARPC2O15144 300 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 LYZL6O75951 148 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 CH25HO95992 272 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 MT-ND1P03886 318 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 IFNW1P05000 195 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 ITGA5P08648 1049 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 TSPAN19P0C672 248 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 PPP3CBP16298 524 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 SELENOPP49908 381 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 LGALS3BPQ08380 585 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 ZP4Q12836 540 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 LURAP1LQ8IV03 231 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 OFCC1Q8IZS5 231 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 PIK3C3Q8NEB9 887 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 STEAP2Q8NFT2 490 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 OR5J2Q8NH18 312 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 PFN4Q8NHR9 129 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 TMEM239Q8WW34 195 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 MUS81Q96NY9 551 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 C1orf21Q9H246 121 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 FKRPQ9H9S5 495 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 NDUFAF4Q9P032 175 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 C6orf203Q9P0P8 240 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 RHCGQ9UBD6 479 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 ENPP4Q9Y6X5 453 aa12.28□□□□□ -0.44
TSPAN4-220ENST00000532375 ENO4A6NNW6 628 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 KPNA4O00629 521 aaPredicted RBP12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 UBOX5O94941 541 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 GOSR1O95249 250 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 VLDLRP98155 873 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 MS4A2Q01362 244 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 ST3GAL3Q11203 375 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 FAPQ12884 760 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 PMS2P3Q13401 168 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 TAB1Q15750 504 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 GABRA6Q16445 453 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 CASP12Q6UXS9 341 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 FKBP9P1Q75LS8 142 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 BHLHA15Q7RTS1 189 aaPredicted RBP12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 PXKQ7Z7A4 578 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 CDC20BQ86Y33 519 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 TMEM123Q8N131 208 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 NRGNQ92686 78 aa12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 SLC7A6OSQ96CW6 309 aaPredicted RBP12.27□□□□□ -0.45
TSPAN4-220ENST00000532375 ZC3HAV1LQ96H79 300 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms