RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 HILS1P60008 231 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 MAD2L1Q13257 205 aaPredicted RBP7.96□□□□□ -1.14
NEDD8-206ENST00000531430 GSTA3Q16772 222 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 CEACAM16Q2WEN9 425 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 TRMT5Q32P41 509 aaKnown RBP7.96□□□□□ -1.14
NEDD8-206ENST00000531430 GLIPR1L2Q4G1C9 344 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 AWAT1Q58HT5 328 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 ELFN2Q5R3F8 820 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 MRPL2Q5T653 305 aaKnown RBP7.96□□□□□ -1.14
NEDD8-206ENST00000531430 AVPI1Q5T686 147 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 ANXA8L1Q5VT79 327 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 CARD17Q5XLA6 110 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 RNF165Q6ZSG1 346 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF621Q6ZSS3 439 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF771Q7L3S4 317 aaPredicted RBP7.96□□□□□ -1.14
NEDD8-206ENST00000531430 RNF130Q86XS8 419 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 EPHX4Q8IUS5 362 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 HOMEZQ8IX15 550 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 BPIFB2Q8N4F0 458 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 IL17RDQ8NFM7 739 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 MGARPQ8TDB4 240 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 RHOXF2Q9BQY4 288 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 SLC35A5Q9BS91 424 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 SUCNR1Q9BXA5 334 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 MRPL37Q9BZE1 423 aaKnown RBP7.96□□□□□ -1.14
NEDD8-206ENST00000531430 MTHFD2LQ9H903 347 aaPredicted RBP7.96□□□□□ -1.14
NEDD8-206ENST00000531430 DDX28Q9NUL7 540 aaKnown RBP7.96□□□□□ -1.14
NEDD8-206ENST00000531430 CRNNQ9UBG3 495 aaPredicted RBP7.96□□□□□ -1.14
NEDD8-206ENST00000531430 RASD1Q9Y272 281 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 PPIAL4AQ9Y536 164 aa7.96□□□□□ -1.14
NEDD8-206ENST00000531430 PKD1L1Q8TDX9 2849 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 TRAV20A0A0B4J274 112 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 PRAMEF27A3QJZ7 478 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 A8MVM7 634 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 RNASET2O00584 256 aaKnown RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 MPZL1O95297 269 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 AHSA1O95433 338 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 PNPP00491 289 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 AVPP01185 164 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 IGKV3-15P01624 115 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 IGLV1-44P01699 117 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 HLA-HP01893 362 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 C1QCP02747 245 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 TFP02787 698 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 GSNP06396 782 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 DBIP07108 87 aaKnown RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 IGFBP1P08833 259 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 NR4A1P22736 598 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 RPS5P46782 204 aaKnown RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 LIMS1P48059 325 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 MAP2K6P52564 334 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 AQP5P55064 265 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 SH3BGRP55822 239 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 TMEM33P57088 247 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 GALK2Q01415 458 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 EMX2Q04743 252 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 FUT5Q11128 374 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 EPS8Q12929 822 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 C3orf36Q3SXR2 165 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 SLC9B1Q4ZJI4 515 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 PDLIM3Q53GG5 364 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 XKR7Q5GH72 579 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 C1orf140Q5VVS0 124 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 ACSM5Q6NUN0 579 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 RBMS3Q6XE24 437 aaKnown RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 LRP11Q86VZ4 500 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 VRK2Q86Y07 508 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 PEX5LQ8IYB4 626 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 RNF217Q8TC41 542 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 PNPT1Q8TCS8 783 aaKnown RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 MIPOL1Q8TD10 442 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 MAGEE2Q8TD90 523 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 EPS8L3Q8TE67 593 aaKnown RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 YIPF5Q969M3 257 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 MRPL24Q96A35 216 aaKnown RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF837Q96EG3 531 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 MS4A3Q96HJ5 214 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 SLC6A7Q99884 636 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 NOX3Q9HBY0 568 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 GPR35Q9HC97 309 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 MOV10Q9HCE1 1003 aaKnown RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 SLC52A3Q9NQ40 469 aa7.95□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF275Q9NSD4 429 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 NOP53Q9NZM5 478 aaKnown RBP7.95□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF503-AS2A6NEH8 195 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 AGAP5A6NIR3 686 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 HMGN4O00479 90 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 TMPRSS2O15393 492 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 PLPP2O43688 288 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 ZNF432O94892 652 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 TFPTP0C1Z6 253 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 ACHEP22303 614 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 FPR2P25090 351 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 LSP1P33241 339 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 S100A3P33764 101 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 RAD52P43351 418 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 PTDSS1P48651 473 aaKnown RBP7.94□□□□□ -1.14
NEDD8-206ENST00000531430 ANXA11P50995 505 aaKnown RBP7.94□□□□□ -1.14
NEDD8-206ENST00000531430 PLAURQ03405 335 aa7.94□□□□□ -1.14
NEDD8-206ENST00000531430 PDCD2Q16342 344 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms