RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CRISP3P54108 245 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 DSTNP60981 165 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 ARF1P84077 181 aaKnown RBP15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 LRRC74AQ0VAA2 488 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 LARS2Q15031 903 aaKnown RBP15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 SVOPLQ8N434 492 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 MAGEE2Q8TD90 523 aaPredicted RBP15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 ZNF837Q96EG3 531 aaPredicted RBP15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 TMEM19Q96HH6 336 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 PTDSS2Q9BVG9 487 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 LINC00470Q9BZP3 86 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 CENPHQ9H3R5 247 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 CALML5Q9NZT1 146 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 V9GYY5 206 aaPredicted RBP15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 OR6C65A6NJZ3 312 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 AHSA1O95433 338 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 ANP32DO95626 131 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 IGKV3-15P01624 115 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 KITP10721 976 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 DAOP14920 347 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 EGR4Q05215 589 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 C3orf36Q3SXR2 165 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 NUP37Q8NFH4 326 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 OR4F15Q8NGB8 312 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 MFSD8Q8NHS3 518 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 STK35Q8TDR2 534 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 VPS33AQ96AX1 596 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 TRIM44Q96DX7 344 aaPredicted RBP15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 KTI12Q96EK9 354 aaPredicted RBP15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 SPATA9Q9BWV2 254 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 RAB1BQ9H0U4 201 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 TPT1P8Q9HAU6 139 aa15.96■□□□□ 0.15
SSSCA1-206ENST00000531405 A0A096LPI6 279 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 SH3PXD2BA1X283 911 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 SEC14L2O76054 403 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 ZNF432O94892 652 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 NPR2P20594 1047 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 SH3BGRP55822 239 aaPredicted RBP15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 NPRL3Q12980 569 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 NXNQ6DKJ4 435 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 SPATA21Q7Z572 469 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 MREGQ8N565 214 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 GLB1L3Q8NCI6 653 aaPredicted RBP15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 ZNF540Q8NDQ6 660 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 ZNF317Q96PQ6 595 aaPredicted RBP15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 DOK1Q99704 481 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 GPR35Q9HC97 309 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 B3GAT1Q9P2W7 334 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 ZNF232Q9UNY5 417 aa15.95■□□□□ 0.14
SSSCA1-206ENST00000531405 IGHV2OR16-5A0A0B4J2B6 119 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 TMEM129A0AVI4 362 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 HDAC3O15379 428 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 LILRA1O75019 489 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 SLC22A3O75751 556 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 IL6P05231 212 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 IGFBP1P08833 259 aaPredicted RBP15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 NUDT7P0C024 238 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 CBR1P16152 277 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 ZNF43P17038 809 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 PAX7P23759 505 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 GIFP27352 417 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 GTF2E2P29084 291 aaKnown RBP15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 SQLEQ14534 574 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 ZSWIM7Q19AV6 140 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 CEACAM16Q2WEN9 425 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 PDCD4Q53EL6 469 aaKnown RBP15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 ZNF311Q5JNZ3 666 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 WDR93Q6P2C0 686 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 CDK20Q8IZL9 346 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 FAM169BQ8N8A8 192 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 ANKRD42Q8N9B4 389 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 C1orf159Q96HA4 380 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 SNX18Q96RF0 628 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 ZNF442Q9H7R0 627 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 PRDM4Q9UKN5 801 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 RCE1Q9Y256 329 aa15.94■□□□□ 0.14
SSSCA1-206ENST00000531405 DYSFO75923 2080 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 A0A0G2JPF8 293 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 HNRNPCL2B2RXH8 293 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 HNRNPCL3B7ZW38 293 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 LYNX1G3V0Z9 82 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 RPL36A-HNRNPH2H7BZ11 118 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 HNRNPCL1O60812 293 aaKnown RBP15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 SLC43A1O75387 559 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 ZCCHC18P0CG32 403 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 HNRNPCL4P0DMR1 293 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 LYNX1P0DP58 116 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 HOXB1P14653 301 aaPredicted RBP15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 CBLP22681 906 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 APEX1P27695 318 aaKnown RBP15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 CHN2P52757 468 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 TRIP10Q15642 601 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 TNFAIP8L3Q5GJ75 292 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 PHYHD1Q5SRE7 291 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 HHATQ5VTY9 493 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 KRT80Q6KB66 452 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 MDP1Q86V88 176 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 GPR137CQ8N3F9 429 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 OR9I1Q8NGQ6 314 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms