RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 PNPT1Q8TCS8 783 aaKnown RBP12.92□□□□□ -0.34
CAPN1-219ENST00000530495 STK35Q8TDR2 534 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 TMEM109Q9BVC6 243 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 AIG1Q9NVV5 245 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 CALML5Q9NZT1 146 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 PCDHB14Q9Y5E9 798 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 FTCDNL1E5RQL4 147 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 KRT75O95678 551 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 CELA3BP08861 270 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 PRG2P13727 222 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 ARR3P36575 388 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 SRP14P37108 136 aaKnown RBP12.91□□□□□ -0.34
CAPN1-219ENST00000530495 MVDP53602 400 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 RNF220Q5VTB9 566 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 SPATA21Q7Z572 469 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 MYPOPQ86VE0 399 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-219ENST00000530495 MEX3DQ86XN8 651 aaKnown RBP12.91□□□□□ -0.34
CAPN1-219ENST00000530495 KDM8Q8N371 416 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 SVOPLQ8N434 492 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 IL17RDQ8NFM7 739 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 UBASH3BQ8TF42 649 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 SLC38A5Q8WUX1 472 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 P2RX2Q9UBL9 471 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 ZNF232Q9UNY5 417 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 RCE1Q9Y256 329 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 CHST2Q9Y4C5 530 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 GPR45Q9Y5Y3 372 aa12.91□□□□□ -0.34
CAPN1-219ENST00000530495 IGHV2OR16-5A0A0B4J2B6 119 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 SH3PXD2BA1X283 911 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 AHSA1O95433 338 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 PNMTP11086 282 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 ZNF43P17038 809 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 ITGA2P17301 1181 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 NCF2P19878 526 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-219ENST00000530495 CRISP3P54108 245 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 DVL1P1P54792 670 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-219ENST00000530495 CDH15P55291 814 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 CLDN17P56750 224 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 POU3F1Q03052 451 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-219ENST00000530495 EGR4Q05215 589 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 LARS2Q15031 903 aaKnown RBP12.9□□□□□ -0.34
CAPN1-219ENST00000530495 ADRM1Q16186 407 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 CCDC36Q8IYA8 594 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 SLC25A36Q96CQ1 311 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 OXGR1Q96P68 337 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 SNX18Q96RF0 628 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 PTDSS2Q9BVG9 487 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 SPATA9Q9BWV2 254 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 GPR35Q9HC97 309 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 SSU72Q9NP77 194 aaKnown RBP12.9□□□□□ -0.34
CAPN1-219ENST00000530495 SLC6A13Q9NSD5 602 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 PNPOQ9NVS9 261 aa12.9□□□□□ -0.34
CAPN1-219ENST00000530495 ZNF443Q9Y2A4 671 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-219ENST00000530495 A0A0G2JPF8 293 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 ZNF503-AS2A6NEH8 195 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 HNRNPCL2B2RXH8 293 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 HNRNPCL3B7ZW38 293 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 RFXANKO14593 260 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 HNRNPCL1O60812 293 aaKnown RBP12.89□□□□□ -0.35
CAPN1-219ENST00000530495 FZD7O75084 574 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 SLC43A1O75387 559 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 IL6P05231 212 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 ADRA2AP08913 450 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 HNRNPCL4P0DMR1 293 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 ETFAP13804 333 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 IFNGR1P15260 489 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 RPS5P46782 204 aaKnown RBP12.89□□□□□ -0.35
CAPN1-219ENST00000530495 STX3Q13277 289 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 TRIP10Q15642 601 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 SERPINA11Q86U17 422 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 CKAP2Q8WWK9 683 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 ZNF837Q96EG3 531 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-219ENST00000530495 KTI12Q96EK9 354 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-219ENST00000530495 ZBTB18Q99592 522 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 ARMC7Q9H6L4 198 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 CRLF2Q9HC73 371 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 DYNLRB1Q9NP97 96 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 B3GAT1Q9P2W7 334 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 METRNQ9UJH8 293 aa12.89□□□□□ -0.35
CAPN1-219ENST00000530495 A0A0A6YYJ9 748 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 LOC102725191A0A1B0GVB3 256 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 SLCO1B7G3V0H7 640 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 SDHDO14521 159 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 TM9SF1O15321 606 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 BCHEP06276 602 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 ZCCHC18P0CG32 403 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 BGNP21810 368 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 PCMT1P22061 227 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 NR4A1P22736 598 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 CRATP43155 626 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 EVX1P49640 407 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 DSTNP60981 165 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 VSNL1P62760 191 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 DAG1Q14118 895 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 CEACAM16Q2WEN9 425 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 ATG16L1Q676U5 607 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 DEF8Q6ZN54 512 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 MDP1Q86V88 176 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 CDK20Q8IZL9 346 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 GPR137CQ8N3F9 429 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms