RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 QPCTLQ9NXS2 382 aa3.95□□□□□ -1.78
CASP4-208ENST00000530309 ZNF225Q9UK10 706 aa3.95□□□□□ -1.78
CASP4-208ENST00000530309 NEU3Q9UQ49 428 aa3.95□□□□□ -1.78
CASP4-208ENST00000530309 KCNIP3Q9Y2W7 256 aa3.95□□□□□ -1.78
CASP4-208ENST00000530309 KANK1Q14678 1352 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 A0A0G2JLM5 398 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 CCDC182A6NF36 153 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 TOM1O60784 492 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 ABOP16442 354 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 MDKP21741 143 aaPredicted RBP3.94□□□□□ -1.78
CASP4-208ENST00000530309 EPS15P42566 896 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 SH3BGRP55822 239 aaPredicted RBP3.94□□□□□ -1.78
CASP4-208ENST00000530309 GPNMBQ14956 572 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 IMMTQ16891 758 aaKnown RBP3.94□□□□□ -1.78
CASP4-208ENST00000530309 CEP55Q53EZ4 464 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 GPR157Q5UAW9 335 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 CTRB2Q6GPI1 263 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 ACP7Q6ZNF0 438 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 ZNF620Q6ZNG0 422 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 ZNF546Q86UE3 836 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 MKXQ8IYA7 352 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 FAM110BQ8TC76 370 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 ACOT11Q8WXI4 607 aaPredicted RBP3.94□□□□□ -1.78
CASP4-208ENST00000530309 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.94□□□□□ -1.78
CASP4-208ENST00000530309 TMEM246Q9BRR3 403 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 RIOK1Q9BRS2 568 aaKnown RBP3.94□□□□□ -1.78
CASP4-208ENST00000530309 TRIM62Q9BVG3 475 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 NIPAL2Q9H841 368 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 SIAEQ9HAT2 523 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 HYPKQ9NX55 129 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 CACNG2Q9Y698 323 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 TDRD6O60522 2096 aaKnown RBP3.94□□□□□ -1.78
CASP4-208ENST00000530309 FANCIQ9NVI1 1328 aa3.94□□□□□ -1.78
CASP4-208ENST00000530309 FAM240BA0A1B0GVZ2 78 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 RBMY1BA6NDE4 496 aaKnown RBP3.93□□□□□ -1.78
CASP4-208ENST00000530309 RBMY1EA6NEQ0 496 aaKnown RBP3.93□□□□□ -1.78
CASP4-208ENST00000530309 TNFSF13O75888 250 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 GIPP09681 153 aaPredicted RBP3.93□□□□□ -1.78
CASP4-208ENST00000530309 RBMY1DP0C7P1 496 aaKnown RBP3.93□□□□□ -1.78
CASP4-208ENST00000530309 RBMY1A1P0DJD3 496 aaKnown RBP3.93□□□□□ -1.78
CASP4-208ENST00000530309 CD1CP29017 333 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 CDH4P55283 916 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 SCRN3Q0VDG4 424 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 UNC119Q13432 240 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 GNMTQ14749 295 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 DGUOKQ16854 277 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 MAJINQ3KP22 176 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 C1orf94Q6P1W5 598 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 UQCC3Q6UW78 93 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 C6orf89Q6UWU4 347 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 H2BFWTQ7Z2G1 175 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 PLA2G4DQ86XP0 818 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 PYROXD1Q8WU10 500 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 NDRG1Q92597 394 aaKnown RBP3.93□□□□□ -1.78
CASP4-208ENST00000530309 ZNF799Q96GE5 643 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 ZNF414Q96IQ9 312 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 TCEANC2Q96MN5 208 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 RIOK2Q9BVS4 552 aaKnown RBP3.93□□□□□ -1.78
CASP4-208ENST00000530309 GBA3Q9H227 469 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 PPA2Q9H2U2 334 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 RANBP3Q9H6Z4 567 aaPredicted RBP3.93□□□□□ -1.78
CASP4-208ENST00000530309 NMRAL1Q9HBL8 299 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 ZNF639Q9UID6 485 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 NPTNQ9Y639 398 aa3.93□□□□□ -1.78
CASP4-208ENST00000530309 COL16A1Q07092 1604 aaPredicted RBP3.92□□□□□ -1.78
CASP4-208ENST00000530309 PRRC2AP48634 2157 aaKnown RBP3.92□□□□□ -1.78
CASP4-208ENST00000530309 A0A0G2JN53 185 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 OR52A4PA6NMU1 304 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 HAS3O00219 553 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 RCC1P18754 421 aaPredicted RBP3.92□□□□□ -1.78
CASP4-208ENST00000530309 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 RPL23AP62750 156 aaKnown RBP3.92□□□□□ -1.78
CASP4-208ENST00000530309 ERVK-25P63136 954 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 MRPL28Q13084 256 aaKnown RBP3.92□□□□□ -1.78
CASP4-208ENST00000530309 CYTH1Q15438 398 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 ZNF658BQ4V348 819 aaPredicted RBP3.92□□□□□ -1.78
CASP4-208ENST00000530309 PHYHD1Q5SRE7 291 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 IGFL2Q6UWQ7 119 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 COX15Q7KZN9 410 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 TGIF2LXQ8IUE1 241 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 TMEM61Q8N0U2 210 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 BLOC1S5Q8TDH9 187 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 FGF14Q92915 247 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 GCOM2Q9BZD3 368 aaPredicted RBP3.92□□□□□ -1.78
CASP4-208ENST00000530309 LY9Q9HBG7 655 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 EML4Q9HC35 981 aaKnown RBP3.92□□□□□ -1.78
CASP4-208ENST00000530309 CCL28Q9NRJ3 127 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 GLRX2Q9NS18 164 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 CLCF1Q9UBD9 225 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 MMP17Q9ULZ9 603 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 ASB3Q9Y575 518 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 N6AMT1Q9Y5N5 214 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 SLC25A15Q9Y619 301 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 FRMPD3Q5JV73 1810 aa3.92□□□□□ -1.78
CASP4-208ENST00000530309 SYNJ2BP-COX16A0A087WUM0 186 aa3.91□□□□□ -1.78
CASP4-208ENST00000530309 C12orf71A8MTZ7 269 aa3.91□□□□□ -1.78
CASP4-208ENST00000530309 C12orf77C9JDV5 145 aa3.91□□□□□ -1.78
CASP4-208ENST00000530309 FOXE1O00358 373 aaPredicted RBP3.91□□□□□ -1.78
CASP4-208ENST00000530309 MOSP00540 346 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms