RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 RPS5P46782 204 aaKnown RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 PPP3R1P63098 170 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 IFITM3Q01628 133 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 CDC20Q12834 499 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 HNRNPA0Q13151 305 aaKnown RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 HSPB2Q16082 182 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 COL28A1Q2UY09 1125 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 C1orf140Q5VVS0 124 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 SLC6A19Q695T7 634 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 DMKNQ6E0U4 476 aaPredicted RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 SLC16A9Q7RTY1 509 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 LYSMD2Q8IV50 215 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 DND1Q8IYX4 353 aaKnown RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 TMEM105Q8N8V8 129 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 ZFP41Q8N8Y5 198 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 SNX33Q8WV41 574 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 ABTB1Q969K4 478 aaPredicted RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 KCTD12Q96CX2 325 aaKnown RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 ZMYND19Q96E35 227 aaPredicted RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 Q96M85 177 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 ALG12Q9BV10 488 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 HDHD5Q9BXW7 423 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 DEFB126Q9BYW3 111 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 CPNE5Q9HCH3 593 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 APMAPQ9HDC9 416 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 INIPQ9NRY2 104 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 FBXL4Q9UKA2 621 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 YARS2Q9Y2Z4 477 aaKnown RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 TMEM72A0PK05 275 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 ANKRD33BA6NCL7 494 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 FLRT2O43155 660 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 GPRIN2O60269 458 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TMEM127O75204 238 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 GATBO75879 557 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 OR6A2O95222 327 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 GYPBP06028 91 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 FBXO45P0C2W1 286 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 CCKBRP32239 447 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TGM4P49221 684 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 ZP4Q12836 540 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TOMM34Q15785 309 aaPredicted RBP13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 VASNQ6EMK4 673 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 DESI1Q6ICB0 168 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TMEM91Q6ZNR0 172 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 EXD3Q8N9H8 876 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 LSM14AQ8ND56 463 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF248Q8NDW4 579 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 ABHD4Q8TB40 342 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 SETD6Q8TBK2 473 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 M1APQ8TC57 530 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 ELP5Q8TE02 316 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 RASD2Q96D21 266 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 ZPBPQ9BS86 351 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 MFRPQ9BY79 579 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 POTEKPQ9BYX7 375 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 QPCTLQ9NXS2 382 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 ETAA1Q9NY74 926 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TMEM14AQ9Y6G1 99 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TECTAO75443 2155 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 hCG_2014768A0A024R1R8 64 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TMEM200CA6NKL6 621 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 XKRYO14609 159 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TP53I11O14683 189 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 PTTG1O95997 202 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 IGHMP01871 453 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 APOA1P02647 267 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TFP02787 698 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 SP9P0CG40 484 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 MYL9P24844 172 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 PYCR1P32322 319 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 OR12D2P58182 307 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 SIRPAP78324 504 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 MXD1Q05195 221 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 SNTA1Q13424 505 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 SLC25A53Q5H9E4 307 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 LINC01590Q5TEZ4 76 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TMEM81Q6P7N7 255 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 XKRXQ6PP77 449 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 ARL9Q6T311 187 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TRILQ7L0X0 811 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 GDPD1Q8N9F7 314 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 SCAIQ8N9R8 606 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 OR2I1PQ8NGU4 316 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 MFSD8Q8NHS3 518 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 DDIT4LQ96D03 193 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 CMKLR1Q99788 373 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 PTDSS2Q9BVG9 487 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF700Q9H0M5 742 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TXNIPQ9H3M7 391 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 ABCB10Q9NRK6 738 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 MRPL39Q9NYK5 338 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 TAS2R5Q9NYW4 299 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 NCDNQ9UBB6 729 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF346Q9UL40 294 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 FKBP7Q9Y680 259 aa13.39□□□□□ -0.27
ECHDC1-220ENST00000528402 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 NPIPB13A6NJU9 1138 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 CENPBD1B2RD01 187 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 NPIPB4C9JG80 1138 aa13.38□□□□□ -0.27
ECHDC1-220ENST00000528402 ADAM10O14672 748 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms