RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 HSPA12BQ96MM6 686 aa13.45□□□□□ -0.26
CAPN1-214ENST00000528165 ZNF350Q9GZX5 532 aa13.45□□□□□ -0.26
CAPN1-214ENST00000528165 TMEM185BQ9H7F4 350 aa13.45□□□□□ -0.26
CAPN1-214ENST00000528165 SYNPO2LQ9H987 977 aa13.45□□□□□ -0.26
CAPN1-214ENST00000528165 FKRPQ9H9S5 495 aa13.45□□□□□ -0.26
CAPN1-214ENST00000528165 APMAPQ9HDC9 416 aa13.45□□□□□ -0.26
CAPN1-214ENST00000528165 GXYLT2A0PJZ3 443 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 H0YC42 278 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 GTF2F2P13984 249 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 BTN3A2P78410 334 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 HFEQ30201 348 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 TMEM88Q6PEY1 159 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 DNM1P46Q6ZS02 220 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 MTSS1LQ765P7 747 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 TMPRSS12Q86WS5 348 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 SLC35F3Q8IY50 421 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 SLC39A11Q8N1S5 342 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 STK35Q8TDR2 534 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 ZNF707Q96C28 371 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-214ENST00000528165 TSPAN10Q9H1Z9 355 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-214ENST00000528165 PIGMQ9H3S5 423 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 SERTAD3Q9UJW9 196 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 MOKQ9UQ07 419 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 PRSS44E7EML9 344 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 GPR31O00270 319 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 TGM5O43548 720 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 EIF4E2O60573 245 aaKnown RBP13.44□□□□□ -0.26
CAPN1-214ENST00000528165 GP1BAP07359 652 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 RAB13P51153 203 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 RAB28P51157 221 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 LUMP51884 338 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-214ENST00000528165 NANOS3P60323 173 aaKnown RBP13.44□□□□□ -0.26
CAPN1-214ENST00000528165 GPR85P60893 370 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 NTHL1P78549 312 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 CAP1Q01518 475 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 LTBQ06643 244 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.44□□□□□ -0.26
CAPN1-214ENST00000528165 BOLLQ8N9W6 283 aaKnown RBP13.44□□□□□ -0.26
CAPN1-214ENST00000528165 OR6K6Q8NGW6 343 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 OR8K3Q8NH51 312 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 RGP1Q92546 391 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-214ENST00000528165 SLC19A3Q9BZV2 496 aa13.44□□□□□ -0.26
CAPN1-214ENST00000528165 RSPH9Q9H1X1 276 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-214ENST00000528165 ZNF768Q9H5H4 540 aaKnown RBP13.44□□□□□ -0.26
CAPN1-214ENST00000528165 ABT1Q9ULW3 272 aaKnown RBP13.44□□□□□ -0.26
CAPN1-214ENST00000528165 TRAV14DV4A0A0A6YYC5 116 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 ABHD14A-ACY1A0A1B0GW23 586 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 XRCC3O43542 346 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 AKAIN1P0CW23 69 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 EPCAMP16422 314 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 PVALBP20472 110 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-214ENST00000528165 AK4P27144 223 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-214ENST00000528165 RORAP35398 523 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 DIO1P49895 249 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 DCST2Q5T1A1 773 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 BEST3Q8N1M1 668 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 SVBPQ8N300 66 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 LRFN5Q96NI6 719 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 APOBEC3BQ9UH17 382 aaKnown RBP13.43□□□□□ -0.26
CAPN1-214ENST00000528165 CYB5R1Q9UHQ9 305 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 MAFFQ9ULX9 164 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 IER3IP1Q9Y5U9 82 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 THSD7BQ9C0I4 1608 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 RNGTTO60942 597 aaKnown RBP13.43□□□□□ -0.26
CAPN1-214ENST00000528165 PAK4O96013 591 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-214ENST00000528165 ADRB3P13945 408 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 RPS4Y1P22090 263 aaKnown RBP13.43□□□□□ -0.26
CAPN1-214ENST00000528165 CCR2P41597 374 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 TSFMP43897 325 aaKnown RBP13.43□□□□□ -0.26
CAPN1-214ENST00000528165 SOX2P48431 317 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 UQCC3Q6UW78 93 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 FANCFQ9NPI8 374 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 PRDM9Q9NQV7 894 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 BIN3Q9NQY0 253 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 COA4Q9NYJ1 87 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 CHRNA9Q9UGM1 479 aa13.43□□□□□ -0.26
CAPN1-214ENST00000528165 APOC1P02654 83 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 ANXA2P07355 339 aaKnown RBP13.42□□□□□ -0.26
CAPN1-214ENST00000528165 GRPRP30550 384 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 SLC43A2Q8N370 569 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 CCDC107Q8WV48 283 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 SLC25A28Q96A46 364 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 COX14Q96I36 57 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 ZNF559Q9BR84 538 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 CHST6Q9GZX3 395 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 KCNE5Q9UJ90 142 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 ERVK-19Q9WJR5 959 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 PLEKHM1Q9Y4G2 1056 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 WNT6Q9Y6F9 365 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 COL4A6Q14031 1691 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 ARPC4-TTLL3A0A0A6YYG9 625 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-214ENST00000528165 C8AP07357 584 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 ADRA2CP18825 462 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 Q499Y3 187 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 OR4N5Q8IXE1 308 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 PUSL1Q8N0Z8 303 aaKnown RBP13.42□□□□□ -0.26
CAPN1-214ENST00000528165 C12orf45Q8N5I9 185 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-214ENST00000528165 C10orf90Q96M02 699 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms