RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 SNTB2Q13425 540 aaKnown RBP19.37■□□□□ 0.69
VPS28-205ENST00000526204 FCN2Q15485 313 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 CD226Q15762 336 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 ALG10Q5BKT4 473 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 FAM205BPQ63HN1 556 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 THOC7Q6I9Y2 204 aaKnown RBP19.37■□□□□ 0.69
VPS28-205ENST00000526204 FAM122BQ7Z309 247 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 NUP54Q7Z3B4 507 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 GATSQ8NAP1 163 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 PHOSPHO1Q8TCT1 267 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 PHF21AQ96BD5 680 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 MMP25Q9NPA2 562 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 TRABD2BA6NFA1 517 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 ITGA10O75578 1167 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 GALK2Q01415 458 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 EMC4Q5J8M3 183 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 ZNF767PQ75MW2 155 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 FAM220AQ7Z4H9 259 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 LRRC75AQ8NAA5 344 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 SLC46A1Q96NT5 459 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 ORAI3Q9BRQ5 295 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 OR51J1Q9H342 316 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 PDE7BQ9NP56 450 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 SOHLH2Q9NX45 425 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 GMEB2Q9UKD1 530 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 MRTO4Q9UKD2 239 aaKnown RBP19.36■□□□□ 0.69
VPS28-205ENST00000526204 HSPB11Q9Y547 144 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 FITM1A5D6W6 292 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 PIN1P1O15428 100 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 ZNF264O43296 627 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 SERPINI2O75830 405 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 ZFPL1O95159 310 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 TXNDC12O95881 172 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 CCR4P51679 360 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 SLC37A1P57057 533 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 CTXN1P60606 82 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 KLF9Q13886 244 aaPredicted RBP19.36■□□□□ 0.69
VPS28-205ENST00000526204 LAMTOR1Q6IAA8 161 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 BTN2A1Q7KYR7 527 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 GKN2Q86XP6 184 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 CMTM4Q8IZR5 234 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 METTL27Q8N6F8 245 aaPredicted RBP19.36■□□□□ 0.69
VPS28-205ENST00000526204 MSANTD3Q96H12 275 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 DERL3Q96Q80 235 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 CHRNA10Q9GZZ6 450 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 RANBP3Q9H6Z4 567 aaPredicted RBP19.36■□□□□ 0.69
VPS28-205ENST00000526204 EPHA6Q9UF33 1036 aa19.36■□□□□ 0.69
VPS28-205ENST00000526204 TMEM184BQ9Y519 407 aaPredicted RBP19.36■□□□□ 0.69
VPS28-205ENST00000526204 A0A1B0GVT2 93 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 SMLR1H3BR10 107 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 FABP7O15540 132 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 ASAH2BP0C7U1 165 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 GRM7Q14831 915 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 ESPNLQ6ZVH7 1005 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 EXD3Q8N9H8 876 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 PTPMT1Q8WUK0 201 aaPredicted RBP19.35■□□□□ 0.69
VPS28-205ENST00000526204 MOGAT1Q96PD6 335 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 LMF1Q96S06 567 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 PTTG3PQ9NZH4 202 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 SLCO1B1Q9Y6L6 691 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 V9GY05 133 aa19.35■□□□□ 0.69
VPS28-205ENST00000526204 TLCD2A6NGC4 264 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 UTS2O95399 124 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 MAPK3P27361 379 aaPredicted RBP19.34■□□□□ 0.69
VPS28-205ENST00000526204 UQCRC1P31930 480 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 GNG2P59768 71 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 NANOS3P60323 173 aaKnown RBP19.34■□□□□ 0.69
VPS28-205ENST00000526204 RNASE12Q5GAN4 147 aaKnown RBP19.34■□□□□ 0.69
VPS28-205ENST00000526204 LSM14AQ8ND56 463 aaKnown RBP19.34■□□□□ 0.69
VPS28-205ENST00000526204 SLITRK2Q9H156 845 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 C12orf10Q9HB07 376 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 PLEKHA1Q9HB21 404 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 UCKL1Q9NWZ5 548 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 MMACHCQ9Y4U1 282 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 ACOD1A6NK06 481 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 FAM171A2A8MVW0 826 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 AKR7A2O43488 359 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 H2AFB2P0C5Z0 115 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 ANXA3P12429 323 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 PRKCAP17252 672 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 GRPRP30550 384 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 RORAP35398 523 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 PPM1FP49593 454 aaPredicted RBP19.34■□□□□ 0.69
VPS28-205ENST00000526204 RPL6Q02878 288 aaKnown RBP19.34■□□□□ 0.69
VPS28-205ENST00000526204 FAM199XQ6PEV8 388 aaPredicted RBP19.34■□□□□ 0.69
VPS28-205ENST00000526204 CBLN3Q6UW01 205 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 Q6ZS52 159 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 EID2Q8N6I1 236 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 ZNF511Q8NB15 262 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 OR56B4Q8NH76 319 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 ADAD1Q96M93 576 aaKnown RBP19.34■□□□□ 0.69
VPS28-205ENST00000526204 MNTQ99583 582 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 GRHPRQ9UBQ7 328 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 EYSQ5T1H1 3165 aa19.34■□□□□ 0.69
VPS28-205ENST00000526204 IDSB3KWA1 339 aa19.33■□□□□ 0.69
VPS28-205ENST00000526204 C2CD4DB7Z1M9 353 aa19.33■□□□□ 0.69
VPS28-205ENST00000526204 OIP5O43482 229 aa19.33■□□□□ 0.69
VPS28-205ENST00000526204 ECDO95905 644 aaPredicted RBP19.33■□□□□ 0.69
VPS28-205ENST00000526204 NME1P15531 152 aaKnown RBP19.33■□□□□ 0.69
VPS28-205ENST00000526204 GDNFP39905 211 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms