RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 MYNNQ9NPC7 610 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 DMRT3Q9NQL9 472 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 COMMD9Q9P000 198 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 FOXJ3Q9UPW0 622 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 CARHSP1Q9Y2V2 147 aaKnown RBP10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 LOC100509620A0A075B734 347 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 TRBV2A0A0J9YWF9 115 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 A0A1B0GTQ1 180 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 URADA6NGE7 173 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 IGLV3-27P01718 113 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 CHRM4P08173 479 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 GTF2F2P13984 249 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 PNLIPRP1P54315 467 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 LASP1Q14847 261 aaKnown RBP10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 PON3Q15166 354 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 LY6G6FQ5SQ64 297 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 COL13A1Q5TAT6 717 aaPredicted RBP10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 ZNF620Q6ZNG0 422 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 SLC39A11Q8N1S5 342 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 LINC00471Q8N535 108 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 KCNRGQ8N5I3 272 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 SCAMP4Q969E2 229 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 SSX3Q99909 188 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 MICU1Q9BPX6 476 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 DPH1Q9BZG8 443 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 PLEKHA1Q9HB21 404 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 ZCCHC3Q9NUD5 404 aaKnown RBP10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 TRIOO75962 3097 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 IFITM5A6NNB3 132 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 ACOT7O00154 380 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 RBBP9O75884 186 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 ATP1B2P14415 290 aaPredicted RBP10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 SRMP19623 302 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 NT5EP21589 574 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 ITPKBP27987 946 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 LAP3P28838 519 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 AGTR1P30556 359 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 ATP1B3P54709 279 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 TAS2R20P59543 309 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 ZNF85Q03923 595 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 OLFML2AQ68BL7 652 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 UNQ6494/PRO21346Q6UXR6 183 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 ETFBKMTQ8IXQ9 262 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 TEAD3Q99594 435 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 SMCO4Q9NRQ5 59 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 BRWD1Q9NSI6 2320 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 TREM2Q9NZC2 230 aa10.35□□□□□ -0.75
CLNS1A-204ENST00000525428 A0A087WV48 116 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 NEDD8-MDP1E9PL57 170 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 TYRP1P17643 537 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 CORO1AP31146 461 aaKnown RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 NAA10P41227 235 aaPredicted RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 TMEM44Q2T9K0 475 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 ZNF311Q5JNZ3 666 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 DMKNQ6E0U4 476 aaPredicted RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 DBX2Q6ZNG2 339 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 ZNF561Q8N587 486 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 PPP1R1CQ8WVI7 109 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 RGP1Q92546 391 aaPredicted RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 BBS4Q96RK4 519 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 SEC11CQ9BY50 192 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 METTL1Q9UBP6 276 aaKnown RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 KCNE3Q9Y6H6 103 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 MYO16Q9Y6X6 1858 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 A0A0B4J2A0 478 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 RNF222A6NCQ9 220 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 HIDE1A8MVS5 230 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 TERTO14746 1132 aaKnown RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 CSN2P05814 226 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 RHOP08100 348 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 SNRNP70P08621 437 aaKnown RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 SFTA3P0C7M3 94 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 GKN3PP0CG01 181 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 SPTBP11277 2137 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 LAG3P18627 525 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 PDHA2P29803 388 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 TDGQ13569 410 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 ARSIQ5FYB1 569 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 HENMT1Q5T8I9 393 aaKnown RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 FAM83HQ6ZRV2 1179 aaPredicted RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 KRT77Q7Z794 578 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 SETD7Q8WTS6 366 aaKnown RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 MARS2Q96GW9 593 aaKnown RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 HSPA12BQ96MM6 686 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 GFI1Q99684 422 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 NKX3-1Q99801 234 aaPredicted RBP10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 TOLLIPQ9H0E2 274 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 ANKRD10Q9NXR5 420 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 OR5V1Q9UGF6 321 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 SHPKQ9UHJ6 478 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 GNG8Q9UK08 70 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 TNFSF18Q9UNG2 199 aa10.34□□□□□ -0.75
CLNS1A-204ENST00000525428 TRAV1-2A0A0B4J238 106 aa10.33□□□□□ -0.76
CLNS1A-204ENST00000525428 ARGFXA6NJG6 315 aa10.33□□□□□ -0.76
CLNS1A-204ENST00000525428 IDSB3KWA1 339 aa10.33□□□□□ -0.76
CLNS1A-204ENST00000525428 CD3DP04234 171 aa10.33□□□□□ -0.76
CLNS1A-204ENST00000525428 HEXAP06865 529 aa10.33□□□□□ -0.76
CLNS1A-204ENST00000525428 ZGLP1P0C6A0 271 aa10.33□□□□□ -0.76
CLNS1A-204ENST00000525428 EDNRAP25101 427 aa10.33□□□□□ -0.76
CLNS1A-204ENST00000525428 TEAD1P28347 426 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms