RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 C7orf26Q96N11 449 aa10.29□□□□□ -0.76
CLNS1A-202ENST00000525064 SORCS2Q96PQ0 1159 aa10.29□□□□□ -0.76
CLNS1A-202ENST00000525064 SLC38A2Q96QD8 506 aa10.29□□□□□ -0.76
CLNS1A-202ENST00000525064 PIF1Q9H611 641 aa10.29□□□□□ -0.76
CLNS1A-202ENST00000525064 VAPAQ9P0L0 249 aa10.29□□□□□ -0.76
CLNS1A-202ENST00000525064 RASD1Q9Y272 281 aa10.29□□□□□ -0.76
CLNS1A-202ENST00000525064 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.28□□□□□ -0.762e-13■■■■■ 32
CLNS1A-202ENST00000525064 TRBV5-3A0A0A0MS03 114 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 A0A1B0GWA3 101 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 TMEM247A6NEH6 219 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 A8MV72 311 aaPredicted RBP10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 M0R082 166 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 POLR3GO15318 223 aaPredicted RBP10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 SEC14L2O76054 403 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 ZNF432O94892 652 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 VAMP5O95183 116 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 CECR9P0C854 216 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 ZNF16P17020 682 aaPredicted RBP10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 ROR2Q01974 943 aaKnown RBP10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 LOXL1Q08397 574 aaPredicted RBP10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 ZSWIM7Q19AV6 140 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 TTMPQ5BVD1 217 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 PHYHD1Q5SRE7 291 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 GCNT6Q5T4J0 391 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 HMBOX1Q6NT76 420 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 BLOC1S3Q6QNY0 202 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 ABHD12BQ7Z5M8 362 aaPredicted RBP10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 GOLGA6L1Q8N7Z2 621 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 ANKS4BQ8N8V4 417 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 ZNF417Q8TAU3 575 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 FAM168AQ92567 244 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 SPDL1Q96EA4 605 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 TNFRSF13CQ96RJ3 184 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 ZNF587Q96SQ5 575 aaPredicted RBP10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 LINC00470Q9BZP3 86 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 CACYBPQ9HB71 228 aaKnown RBP10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 TCF7L2Q9NQB0 619 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 TMEM45AQ9NWC5 275 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 THUMPD1Q9NXG2 353 aaKnown RBP10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 CCDC167Q9P0B6 97 aa10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 CRNNQ9UBG3 495 aaPredicted RBP10.28□□□□□ -0.76
CLNS1A-202ENST00000525064 SVEP1Q4LDE5 3571 aa10.27□□□□□ -0.76
CLNS1A-202ENST00000525064 ARPC4-TTLL3A0A0A6YYG9 625 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 C5orf58C9J3I9 102 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 TRAF3IP2O43734 574 aaPredicted RBP10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 TPST2O60704 377 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 HPRP00739 348 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 IGLV1-44P01699 117 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 IGHV4-31P0DP07 118 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 HLA-DOBP13765 273 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 ETS2P15036 469 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 SLC25A16P16260 332 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 ZNF43P17038 809 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 GRPRP30550 384 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 PRKAR1BP31321 381 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 EFNA4P52798 201 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 DSCR9P59020 149 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 STX1BP61266 288 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 ARF1P84077 181 aaKnown RBP10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 VLDLRP98155 873 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 CDK6Q00534 326 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 NAAAQ02083 359 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 AGBL2Q5U5Z8 902 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 DHRS4L2Q6PKH6 230 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 VHLLQ6RSH7 139 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 SLC35B4Q969S0 331 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 KATNB1Q9BVA0 655 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 RAD21L1Q9H4I0 556 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 ARMC7Q9H6L4 198 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 GPR35Q9HC97 309 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 OBP2BQ9NPH6 170 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 CA10Q9NS85 328 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 KLHL14Q9P2G3 628 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 RPS6KB2Q9UBS0 482 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 PRDM4Q9UKN5 801 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 RCE1Q9Y256 329 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 MXRA5Q9NR99 2828 aa10.27□□□□□ -0.77
CLNS1A-202ENST00000525064 VWC2LB2RUY7 222 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 LRRN3E7EW58 273 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 RPL36A-HNRNPH2H7BZ11 118 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 AIM2O14862 343 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 ERLIN1O75477 346 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 GTF2E2P29084 291 aaKnown RBP10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 AQP1P29972 269 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 UBE2NP61088 152 aaKnown RBP10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 CHRNB3Q05901 458 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 SCARB2Q14108 478 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 SELPLGQ14242 412 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 ADIPOQQ15848 244 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 ADRM1Q16186 407 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 CEACAM16Q2WEN9 425 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 ALG10BQ5I7T1 473 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 FAM69AQ5T7M9 428 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 ANKRD16Q6P6B7 361 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 TMEM123Q8N131 208 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 LSMEM1Q8N8F7 131 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 MAGEE2Q8TD90 523 aaPredicted RBP10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 LRRC8CQ8TDW0 803 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 SLC38A4Q969I6 547 aa10.26□□□□□ -0.77
CLNS1A-202ENST00000525064 OXGR1Q96P68 337 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms