RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TFAP2EQ6VUC0 442 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 C9orf139Q6ZV77 190 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 KRT77Q7Z794 578 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 WDSUB1Q8N9V3 476 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 TRIM58Q8NG06 486 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 OR4S1Q8NGB4 309 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 UTP15Q8TED0 518 aaKnown RBP5.8□□□□□ -1.48
NEDD8-203ENST00000524927 SKA2Q8WVK7 121 aaPredicted RBP5.8□□□□□ -1.48
NEDD8-203ENST00000524927 DNAJC1Q96KC8 554 aaKnown RBP5.8□□□□□ -1.48
NEDD8-203ENST00000524927 FERMT1Q9BQL6 677 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 SLC25A33Q9BSK2 321 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 PRRG4Q9BZD6 226 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 NARFLQ9H6Q4 476 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 MAGIXQ9H6Y5 334 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 MARCH4Q9P2E8 410 aaPredicted RBP5.8□□□□□ -1.48
NEDD8-203ENST00000524927 HOOK1Q9UJC3 728 aaKnown RBP5.8□□□□□ -1.48
NEDD8-203ENST00000524927 CLEC4AQ9UMR7 237 aa5.8□□□□□ -1.48
NEDD8-203ENST00000524927 BICDL2A1A5D9 508 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 URADA6NGE7 173 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 CCL22O00626 93 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 CTNSO60931 367 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 RSL1D1O76021 490 aaKnown RBP5.79□□□□□ -1.48
NEDD8-203ENST00000524927 ETHE1O95571 254 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 ZNF17P17021 662 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 SYT1P21579 422 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 CMA1P23946 247 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 AGTR1P30556 359 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 PPP1R2P41236 205 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 SYKP43405 635 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 ATP4BP51164 291 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 ZNF83P51522 516 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 TPD52P55327 224 aaPredicted RBP5.79□□□□□ -1.48
NEDD8-203ENST00000524927 B3GALT5-AS1P59052 145 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 STX4Q12846 297 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 SERTAD2Q14140 314 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 SGCBQ16585 318 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 WDR73Q6P4I2 378 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 FOXRED2Q8IWF2 684 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 PRR26Q8N8Z3 221 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 IPMKQ8NFU5 416 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 NT5CQ8TCD5 201 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 TMCO6Q96DC7 493 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 SLC47A1Q96FL8 570 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 SENP5Q96HI0 755 aaPredicted RBP5.79□□□□□ -1.48
NEDD8-203ENST00000524927 GAL3ST4Q96RP7 486 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 BAG1Q99933 345 aaPredicted RBP5.79□□□□□ -1.48
NEDD8-203ENST00000524927 MRPL1Q9BYD6 325 aaKnown RBP5.79□□□□□ -1.48
NEDD8-203ENST00000524927 WWTR1Q9GZV5 400 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 CENPHQ9H3R5 247 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 METTL7AQ9H8H3 244 aa5.79□□□□□ -1.48
NEDD8-203ENST00000524927 DMBT1Q9UGM3 2413 aaPredicted RBP5.79□□□□□ -1.48
NEDD8-203ENST00000524927 PLECQ15149 4684 aaKnown RBP5.79□□□□□ -1.48
NEDD8-203ENST00000524927 ICOSLGO75144 302 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 ABCB1P08183 1280 aaPredicted RBP5.78□□□□□ -1.48
NEDD8-203ENST00000524927 SMIM10L1P0DMW3 83 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 GGT1P19440 569 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 CAPZA2P47755 286 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 SLC6A8P48029 635 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 HNRNPFP52597 415 aaKnown RBP5.78□□□□□ -1.48
NEDD8-203ENST00000524927 PGGT1BP53609 377 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 RAB38P57729 211 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 RAB8AP61006 207 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 RGS1Q08116 209 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 DPYSL3Q14195 570 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 HERPUD1Q15011 391 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 ZNF311Q5JNZ3 666 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 KLF17Q5JT82 389 aaPredicted RBP5.78□□□□□ -1.48
NEDD8-203ENST00000524927 PAPPA-AS1Q5QFB9 102 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 FRG2Q64ET8 278 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 MFSD12Q6NUT3 480 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 ZNF620Q6ZNG0 422 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 TMEM86BQ8N661 226 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 SMIM10Q96HG1 83 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 OXNAD1Q96HP4 312 aaPredicted RBP5.78□□□□□ -1.48
NEDD8-203ENST00000524927 ZNF670Q9BS34 389 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 OSBPL11Q9BXB4 747 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 RTN4RQ9BZR6 473 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 NOX4Q9NPH5 578 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 FAM114A2Q9NRY5 505 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 ASIC3Q9UHC3 531 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 ANAPC7Q9UJX3 599 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 DKKL1Q9UK85 242 aa5.78□□□□□ -1.48
NEDD8-203ENST00000524927 PPIAL4EA0A075B759 164 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 PPIAL4CA0A0B4J2A2 164 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 OR5H1A6NKK0 313 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 OR6C76A6NM76 312 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 KRTAP29-1A8MX34 341 aaPredicted RBP5.77□□□□□ -1.49
NEDD8-203ENST00000524927 PPIAL4DF5H284 164 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 OR1I1O60431 355 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 FGFR1OPO95684 399 aaKnown RBP5.77□□□□□ -1.49
NEDD8-203ENST00000524927 SLC16A8O95907 504 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 AGTP01019 485 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 PPIAL4FP0DN26 164 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 UCHL3P15374 230 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 TMEM33P57088 247 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 IL1RL1Q01638 556 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 SLAMF1Q13291 335 aa5.77□□□□□ -1.49
NEDD8-203ENST00000524927 EFTUD2Q15029 972 aaKnown RBP eCLIP5.77□□□□□ -1.491e-8■■■□□ 18.3
NEDD8-203ENST00000524927 EBPQ15125 230 aaKnown RBP5.77□□□□□ -1.49
NEDD8-203ENST00000524927 TMEM64Q6YI46 380 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms