RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CAPZA2P47755 286 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 MAP2K6P52564 334 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 HGFACQ04756 655 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 ZNF311Q5JNZ3 666 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 CARD17Q5XLA6 110 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 MAVSQ7Z434 540 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 RNF217Q8TC41 542 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 OR52B2Q96RD2 323 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 KATNB1Q9BVA0 655 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 PTDSS2Q9BVG9 487 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 SPATA9Q9BWV2 254 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 CACYBPQ9HB71 228 aaKnown RBP13.39□□□□□ -0.27
MRPS28-209ENST00000522987 TMEM160Q9NX00 188 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 CALML5Q9NZT1 146 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 ZNF232Q9UNY5 417 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 RASD1Q9Y272 281 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 TMEM120BA0PK00 339 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 TRPC5OSA6NMA1 111 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 B9A039 149 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 LYNX1G3V0Z9 82 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 hCG_2039718K7EN88 272 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 NPIPB7O75200 414 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 SNUPNO95149 360 aaKnown RBP13.38□□□□□ -0.27
MRPS28-209ENST00000522987 IL6P05231 212 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 LYNX1P0DP58 116 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 IL2RGP31785 369 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 TXNL4AP83876 142 aaKnown RBP13.38□□□□□ -0.27
MRPS28-209ENST00000522987 EGR4Q05215 589 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 CEACAM16Q2WEN9 425 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 PDCD4Q53EL6 469 aaKnown RBP13.38□□□□□ -0.27
MRPS28-209ENST00000522987 RNF220Q5VTB9 566 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 SLC2A7Q6PXP3 512 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 SPATA21Q7Z572 469 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 KIRREL3Q8IZU9 778 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 RSPO3Q9BXY4 272 aaPredicted RBP13.38□□□□□ -0.27
MRPS28-209ENST00000522987 TPK1Q9H3S4 243 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 OBP2BQ9NPH6 170 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 RPS6KB2Q9UBS0 482 aa13.38□□□□□ -0.27
MRPS28-209ENST00000522987 ARPC4-TTLL3A0A0A6YYG9 625 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 LOC390937A0A1W2PQ73 354 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 OR6C65A6NJZ3 312 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 FTCDNL1E5RQL4 147 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 M0R082 166 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 VAMP5O95183 116 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 IDO1P14902 403 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 ZNF43P17038 809 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 POLR2JP52435 117 aaKnown RBP13.37□□□□□ -0.27
MRPS28-209ENST00000522987 LRRC74AQ0VAA2 488 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 C1DQ13901 141 aaKnown RBP13.37□□□□□ -0.27
MRPS28-209ENST00000522987 CR1LQ2VPA4 569 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 TNFAIP8L3Q5GJ75 292 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 PHYHD1Q5SRE7 291 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 KRT80Q6KB66 452 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 MDP1Q86V88 176 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 COMTD1Q86VU5 262 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 CDK20Q8IZL9 346 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 GPR137CQ8N3F9 429 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 GLB1L3Q8NCI6 653 aaPredicted RBP13.37□□□□□ -0.27
MRPS28-209ENST00000522987 MFSD8Q8NHS3 518 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 ZNF417Q8TAU3 575 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 STK35Q8TDR2 534 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 TAAR8Q969N4 342 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 ITCHQ96J02 903 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 SNX18Q96RF0 628 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 ZNF587Q96SQ5 575 aaPredicted RBP13.37□□□□□ -0.27
MRPS28-209ENST00000522987 EMC6Q9BV81 110 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 GPR35Q9HC97 309 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 DYNLRB1Q9NP97 96 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 THAP1Q9NVV9 213 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 B3GAT1Q9P2W7 334 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 PCDHB14Q9Y5E9 798 aa13.37□□□□□ -0.27
MRPS28-209ENST00000522987 IGHV2OR16-5A0A0B4J2B6 119 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 A0A0G2JPF8 293 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 TMEM247A6NEH6 219 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 HNRNPCL2B2RXH8 293 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 HNRNPCL3B7ZW38 293 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 M0R3G1 203 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 HAX1O00165 279 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 NDUFS8O00217 210 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 HNRNPCL1O60812 293 aaKnown RBP13.36□□□□□ -0.27
MRPS28-209ENST00000522987 SNNO75324 88 aaPredicted RBP13.36□□□□□ -0.27
MRPS28-209ENST00000522987 SLC43A1O75387 559 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 STAMBPO95630 424 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 IGLV1-44P01699 117 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 ZCCHC18P0CG32 403 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 HNRNPCL4P0DMR1 293 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 DAOP14920 347 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 ZNF23P17027 643 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 HTR2AP28223 471 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 GRPRP30550 384 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 CCNIQ14094 377 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 TRIP10Q15642 601 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 NFKBIDQ8NI38 313 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 LINC00470Q9BZP3 86 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 PAIP1Q9H074 479 aaKnown RBP13.36□□□□□ -0.27
MRPS28-209ENST00000522987 RAB1BQ9H0U4 201 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 PLK3Q9H4B4 646 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 RMND5AQ9H871 391 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 CRLF2Q9HC73 371 aa13.36□□□□□ -0.27
MRPS28-209ENST00000522987 CRNNQ9UBG3 495 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms