RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ZNF417Q8TAU3 575 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 PNPLA2Q96AD5 504 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 ADGRG7Q96K78 797 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 TNFRSF13CQ96RJ3 184 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 ZNF587Q96SQ5 575 aaPredicted RBP11.73□□□□□ -0.53
CPNE3-205ENST00000522240 TEX12Q9BXU0 123 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 CHST11Q9NPF2 352 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 FANCFQ9NPI8 374 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 B3GALT5Q9Y2C3 310 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 ATMQ13315 3056 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 TRGV5A0A0B4J1U4 118 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 A0A1W2PNR3 127 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 NPIPB13A6NJU9 1138 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 NPIPB4C9JG80 1138 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 SULT2B1O00204 365 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 EIF1BO60739 113 aaKnown RBP11.72□□□□□ -0.53
CPNE3-205ENST00000522240 CRYABP02511 175 aaKnown RBP11.72□□□□□ -0.53
CPNE3-205ENST00000522240 FAM87AP0C7U9 286 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 APEHP13798 732 aaKnown RBP11.72□□□□□ -0.53
CPNE3-205ENST00000522240 DIO1P49895 249 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 OR2B6P58173 313 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 TEKQ02763 1124 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 RPL18Q07020 188 aaKnown RBP11.72□□□□□ -0.53
CPNE3-205ENST00000522240 ZP4Q12836 540 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 PMS2P3Q13401 168 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 CTU2Q2VPK5 515 aaKnown RBP11.72□□□□□ -0.53
CPNE3-205ENST00000522240 ALG10Q5BKT4 473 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 PDSS1Q5T2R2 415 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 KRT80Q6KB66 452 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 ARHGAP11AQ6P4F7 1023 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 PAQR6Q6TCH4 344 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 DPY19L2P2Q6ZN68 376 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 Q6ZPB1 254 aaPredicted RBP11.72□□□□□ -0.53
CPNE3-205ENST00000522240 H1FNTQ75WM6 255 aaPredicted RBP11.72□□□□□ -0.53
CPNE3-205ENST00000522240 THAP5Q7Z6K1 395 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 SIAH3Q8IW03 269 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 LNX2Q8N448 690 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 LRRC75AQ8NAA5 344 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 OR2V1Q8NHB1 315 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 FAM81AQ8TBF8 368 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 SMPDL3BQ92485 455 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 SLC25A36Q96CQ1 311 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 ZHX1-C8orf76Q96EF9 292 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 CNBD2Q96M20 576 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 MUS81Q96NY9 551 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 SLC38A2Q96QD8 506 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 IMPAD1Q9NX62 359 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 LIPGQ9Y5X9 500 aa11.72□□□□□ -0.53
CPNE3-205ENST00000522240 A0A0J9YW62 118 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 A0A1B0GVC2 190 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 MCIDASD6RGH6 385 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 BLOC1S5-TXNDC5H3BN57 136 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 PLPP3O14495 311 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 ARPC3O15145 178 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 SEC14L5O43304 696 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 IDH3BO43837 385 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 MPZL2O60487 215 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 CLIC3O95833 236 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 IGHMP01871 453 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 HMGN1P05114 100 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 CD14P08571 375 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 ZNF708P17019 499 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 AQP2P41181 271 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 CLDN18P56856 261 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 CLDN20P56880 219 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 RAC3P60763 192 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 PUDPQ08623 228 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 GXYLT1Q4G148 440 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 CLEC12AQ5QGZ9 265 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 TMEM236Q5W0B7 351 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 HBMQ6B0K9 141 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 CASP12Q6UXS9 341 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 CCDC71Q8IV32 467 aaPredicted RBP11.71□□□□□ -0.53
CPNE3-205ENST00000522240 MEIOBQ8N635 442 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 IQCF1Q8N6M8 205 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 OR4Q3Q8NH05 313 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 MOSPD2Q8NHP6 518 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 FBLIM1Q8WUP2 373 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 TRUB1Q8WWH5 349 aaKnown RBP11.71□□□□□ -0.53
CPNE3-205ENST00000522240 ABTB1Q969K4 478 aaPredicted RBP11.71□□□□□ -0.53
CPNE3-205ENST00000522240 DNAJA3Q96EY1 480 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 CRELD1Q96HD1 420 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 TAAR6Q96RI8 345 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 IFT27Q9BW83 186 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 POLDIP3Q9BY77 421 aaKnown RBP11.71□□□□□ -0.53
CPNE3-205ENST00000522240 LDAHQ9H6V9 325 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 NRIP3Q9NQ35 241 aa11.71□□□□□ -0.53
CPNE3-205ENST00000522240 PAQR5Q9NXK6 330 aaPredicted RBP11.71□□□□□ -0.53
CPNE3-205ENST00000522240 MYO18BQ8IUG5 2567 aa11.71□□□□□ -0.54
CPNE3-205ENST00000522240 KIAA1549Q9HCM3 1950 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 AQP7O14520 342 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 EIF1AYO14602 144 aaKnown RBP11.7□□□□□ -0.54
CPNE3-205ENST00000522240 IMPA2O14732 288 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 TNFSF11O14788 317 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 OR6A2O95222 327 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 PPP1R3DO95685 299 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 TXNDC12O95881 172 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 ADORA3P0DMS8 318 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 SFTPCP11686 197 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms