RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 GBAP04062 536 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 TPOP07202 933 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 HEXBP07686 556 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 FHP07954 510 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 VIMP08670 466 aaKnown RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ANXA4P09525 319 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 IGHV4-38-2P0DP08 117 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 BCKDHAP12694 445 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 MMP9P14780 707 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 GNB3P16520 340 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 LBPP18428 481 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 CPN2P22792 545 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 JAK1P23458 1154 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 MMP11P24347 488 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 PPP2R1BP30154 601 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 TIA1P31483 386 aaKnown RBP eCLIP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 XCR1P46094 333 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 LUMP51884 338 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 CLDN8P56748 225 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 HSD17B7P56937 341 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 KRTAP10-12P60413 245 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 BTG2P78543 158 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 TNFRSF17Q02223 184 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 KLC1Q07866 573 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ACTN3Q08043 901 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 C2orf80Q0P641 193 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 PLA2G7Q13093 441 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 SRSF6Q13247 344 aaKnown RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 BIKQ13323 160 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 UBE2V1Q13404 147 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 KIAA1644Q3SXP7 199 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ATP6AP1LQ52LC2 224 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 RFTN2Q52LD8 501 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 VWA2Q5GFL6 755 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 NDUFAF5Q5TEU4 345 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 IL23RQ5VWK5 629 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 FAM71E1Q6IPT2 247 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 NOXRED1Q6NXP6 359 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 FAAP20Q6NZ36 180 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 TMEM205Q6UW68 189 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 EPGNQ6UW88 154 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 FAM47EQ6ZV65 393 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 VASH2Q86V25 355 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 RAB43Q86YS6 212 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 PRSS58Q8IYP2 241 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 LRRC34Q8IZ02 419 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 POGLUT1Q8NBL1 392 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 RBM15BQ8NDT2 890 aaKnown RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 C16orf78Q8WTQ4 265 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 FCAMRQ8WWV6 532 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 METTL21AQ8WXB1 218 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 SMPDL3BQ92485 455 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 TAF15Q92804 592 aaKnown RBP eCLIP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ANKRD9Q96BM1 317 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 TUBGCP3Q96CW5 907 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 TMCO6Q96DC7 493 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 MTERF3Q96E29 417 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 C19orf60Q96EN9 201 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 CHMP6Q96FZ7 201 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 IP6K3Q96PC2 410 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF317Q96PQ6 595 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ABHD1Q96SE0 405 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 MAPKAP1Q9BPZ7 522 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 SIKE1Q9BRV8 207 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 CCDC28BQ9BUN5 200 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 FAIM2Q9BWQ8 316 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ACTL8Q9H568 366 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 WDR55Q9H6Y2 383 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 RPF2Q9H7B2 306 aaKnown RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 WDR41Q9HAD4 459 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 MEAF6Q9HAF1 191 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 MYNNQ9NPC7 610 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 PRTFDC1Q9NRG1 225 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 TAS2R7Q9NYW3 318 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 KLHL9Q9P2J3 617 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 CTSFQ9UBX1 484 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 MARCOQ9UEW3 520 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 GIMAP2Q9UG22 337 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 C3orf18Q9UK00 162 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 FBXW2Q9UKT8 454 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 CES1P1Q9UKY3 287 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 PSME2Q9UL46 239 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 EIF3LQ9Y262 564 aaKnown RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 MRPS33Q9Y291 106 aaKnown RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 TMED5Q9Y3A6 229 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ATG4BQ9Y4P1 393 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ADAMTS9Q9P2N4 1935 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 PI4KAP42356 2102 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 TRIOO75962 3097 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 IGKV3D-11A0A0A0MRZ8 115 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 GOLGA8QA0A0J9YX86 632 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 A0A1W2PQ72 361 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 GOLGA8OA6NCC3 632 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 GMNCA6NCL1 334 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 A6NL46 340 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 WASHC1A8K0Z3 465 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 GABRR3A8MPY1 467 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 IDSB3KWA1 339 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 GOLGA8NF8WBI6 632 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 K7ENP7 123 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms