RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 KLF3P57682 345 aaPredicted RBP6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 SELENOVP59797 346 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 RAE1P78406 368 aaKnown RBP6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 ROR2Q01974 943 aaKnown RBP6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 TSTQ16762 297 aaKnown RBP6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 COX20Q5RI15 118 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 CCNJQ5T5M9 372 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 ZFAND6Q6FIF0 208 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 LRIG3Q6UXM1 1119 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 CNGA4Q8IV77 575 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 DDIASQ8IXT1 998 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 TMEM234Q8WY98 164 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 OR11A1Q9GZK7 315 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 CAB39LQ9H9S4 337 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 ACOXLQ9NUZ1 547 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 SLC7A8Q9UHI5 535 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 REXO2Q9Y3B8 237 aaKnown RBP6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 ZNF264O43296 627 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 MT-ND5P03915 603 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 WNT2P09544 360 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 KIR2DS4P43632 304 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 FGF12P61328 243 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 GALK2Q01415 458 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 ILF2Q12905 390 aaKnown RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 ZKSCAN8Q15776 578 aaPredicted RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 PRAMEF8Q5VWM4 474 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 PRAMEF7Q5VXH5 474 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 RGS7BPQ6MZT1 257 aaPredicted RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 METTL2BQ6P1Q9 378 aaKnown RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 RFWD2Q8NHY2 731 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 C16orf78Q8WTQ4 265 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 DNAJA3Q96EY1 480 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 TSPAN17Q96FV3 270 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 THOC1Q96FV9 657 aaKnown RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 THUMPD3Q9BV44 507 aaKnown RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 FARSBQ9NSD9 589 aaKnown RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 DCAF16Q9NXF7 216 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 HERC1Q15751 4861 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 CENPVL1A0A0U1RR11 272 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 CENPVL3A0A0U1RRI6 287 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 ANKRD28O15084 1053 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 LHBP01229 141 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 IGHV1-46P01743 117 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 UROSP10746 265 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 IMPDH2P12268 514 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 DDCP20711 480 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 PTDSS1P48651 473 aaKnown RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 SLC35A2P78381 396 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 TBX2Q13207 712 aaPredicted RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 SKP2Q13309 424 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 GGTA1PQ4G0N0 100 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 SGO1Q5FBB7 561 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 TTC19Q6DKK2 380 aaPredicted RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 VSTM4Q8IW00 320 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 FITM2Q8N6M3 262 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 TMCO5AQ8N6Q1 288 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 SPERTQ8NA61 448 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 SYNPRQ8TBG9 265 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 GATAD2BQ8WXI9 593 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 SSBP3Q9BWW4 388 aaPredicted RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 BTBD2Q9BX70 525 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 TRIM15Q9C019 465 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 NOL11Q9H8H0 719 aaKnown RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 CTPS2Q9NRF8 586 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 NMRK1Q9NWW6 199 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 NFU1Q9UMS0 254 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 MTO1Q9Y2Z2 717 aaKnown RBP6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 DTNAQ9Y4J8 743 aa6.29□□□□□ -1.4
HMBOX1-208ENST00000521516 P2RY10O00398 339 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 CBFA2T2O43439 604 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 PCDH7O60245 1069 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 FBXO24O75426 580 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 JTBO76095 146 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 PDYNP01213 254 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 ADH4P08319 380 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 THRBP10828 461 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 UBL4AP11441 157 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 HOXD3P31249 432 aaPredicted RBP6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 CCR4P51679 360 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 ATP12AP54707 1039 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 ALDH18A1P54886 795 aaKnown RBP6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 PCBP3P57721 371 aaKnown RBP6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 MGAT5Q09328 741 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 DLG1Q12959 904 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 TRAF3Q13114 568 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 ZMYND11Q15326 602 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 TTMPQ5BVD1 217 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 TCTEX1D4Q5JR98 221 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 ZCCHC12Q6PEW1 402 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 COX18Q8N8Q8 333 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 CPEB3Q8NE35 698 aaKnown RBP6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 SDR9C7Q8NEX9 313 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 GATAD1Q8WUU5 269 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 DDB2Q92466 427 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 ELOVL6Q9H5J4 265 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 VPS29Q9UBQ0 182 aa6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 LSM4Q9Y4Z0 139 aaKnown RBP6.28□□□□□ -1.4
HMBOX1-208ENST00000521516 A0A0U1RQK1 487 aa6.27□□□□□ -1.4
HMBOX1-208ENST00000521516 HLA-HP01893 362 aa6.27□□□□□ -1.4
HMBOX1-208ENST00000521516 NTSP30990 170 aa6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms