RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SGK1O00141 431 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 SLITRK3O94933 977 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 LALBAP00709 142 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 TIMP1P01033 207 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 THY1P04216 161 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 RNH1P13489 461 aaKnown RBP2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 HMGB2P26583 209 aaKnown RBP2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 GDF1P27539 372 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 CD1CP29017 333 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 VHLP40337 213 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 RPL34P49207 117 aaKnown RBP2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 CD47Q08722 323 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 SERTAD2Q14140 314 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 KLHL38Q2WGJ6 581 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 HSP90AB3PQ58FF7 597 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 ATAD3CQ5T2N8 411 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 METTL11BQ5VVY1 283 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 LRRC66Q68CR7 880 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 UNQ9370/PRO34162Q6UXP9 181 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 GTSCR1Q86UQ5 136 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 MCOLN2Q8IZK6 566 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 TTC5Q8N0Z6 440 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 CEND1Q8N111 149 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 UBE2J2Q8N2K1 259 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 ATP6V0D2Q8N8Y2 350 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR4F6Q8NGB9 312 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 HTR3CQ8WXA8 447 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 PLEKHF1Q96S99 279 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 CNN2Q99439 309 aaKnown RBP2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 DEFB126Q9BYW3 111 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 RACGAP1Q9H0H5 632 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 C20orf85Q9H1P6 137 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 SUDS3Q9H7L9 328 aaPredicted RBP2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 ANKRA2Q9H9E1 313 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 NMRAL1Q9HBL8 299 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 NT5MQ9NPB1 228 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 TMEM9Q9P0T7 183 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 PEX16Q9Y5Y5 336 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 DIP2BQ9P265 1576 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 PEAK1Q9H792 1746 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 NOS1P29475 1434 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 IGLV3-22A0A075B6J6 115 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 FAM168BA1KXE4 195 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 TUBAL3A6NHL2 446 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 E7ESA3 106 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 RGS16O15492 202 aaPredicted RBP2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 SRSF10O75494 262 aaKnown RBP2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 TMEM50AO95807 157 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 HSMCR30P0CW71 290 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 HNRNPH3P31942 346 aaKnown RBP2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 GCKP35557 465 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 ATP5OP48047 213 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 OXA1LQ15070 435 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 ARMC12Q5T9G4 340 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 BAIAP2L2Q6UXY1 529 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 FRA10AC1Q70Z53 315 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 MYPOPQ86VE0 399 aaPredicted RBP2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 PPP1R27Q86WC6 154 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 NBPF5PQ86XG9 351 aaPredicted RBP2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 PSTKQ8IV42 348 aaKnown RBP2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 CCDC50Q8IVM0 306 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 TPRX1Q8N7U7 411 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 NECAB1Q8N987 351 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 ZNF485Q8NCK3 441 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 TCTEX1D2Q8WW35 142 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 UFD1Q92890 307 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 PGLYRP4Q96LB8 373 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR5M11Q96RB7 305 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 PANX2Q96RD6 677 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 KIR2DL4Q99706 377 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 NUP58Q9BVL2 599 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 Q9H3A6 140 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 REEP4Q9H6H4 257 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 GLRX2Q9NS18 164 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 VNN3Q9NY84 501 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 RABL2AQ9UBK7 228 aaPredicted RBP2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 ZNF107Q9UII5 783 aaPredicted RBP2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 KIF25Q9UIL4 384 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 STAP1Q9ULZ2 295 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 TMED5Q9Y3A6 229 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 SIPA1L3O60292 1781 aaPredicted RBP2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 KDM3BQ7LBC6 1761 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 NEO1Q92859 1461 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 CD163L1Q9NR16 1453 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 NSD3Q9BZ95 1437 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 NCOA3Q9Y6Q9 1424 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 THSD7BQ9C0I4 1608 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 ALKQ9UM73 1620 aa2.5□□□□□ -2.01
HMGN1P28-201ENST00000521340 RGPD2P0DJD1 1756 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 DHRS7CA6NNS2 312 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 WWP2O00308 870 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 ABCD4O14678 606 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 LYPLA1O75608 230 aaPredicted RBP2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR7A10O76100 309 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 VDAC1P21796 283 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 CASP14P31944 242 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 YWHABP31946 246 aaKnown RBP2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 BTDP43251 543 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 GYG1P46976 350 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 PRRX1P54821 245 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms