RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 NTSP30990 170 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CSTF2P33240 577 aaKnown RBP eCLIP3.48□□□□□ -1.85
CLK4-207ENST00000520909 SOAT1P35610 550 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CHI3L1P36222 383 aaPredicted RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 FEN1P39748 380 aaKnown RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 CDKN2CP42773 168 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 TSFMP43897 325 aaKnown RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 GABRA4P48169 554 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 LIM2P55344 173 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 SKP1P63208 163 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 ELF3P78545 371 aaPredicted RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 ACY1Q03154 408 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 LIPEQ05469 1076 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 PDE7AQ13946 482 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CEACAM7Q14002 265 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CLPPQ16740 277 aaPredicted RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 GTDC1Q4AE62 458 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 C6orf141Q5SZD1 244 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 C6orf163Q5TEZ5 329 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 C1orf189Q5VU69 101 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 GARNL3Q5VVW2 1013 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 NANOGP8Q6NSW7 305 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 FAM180BQ6P0A1 224 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 SLC22A25Q6T423 547 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 DLEU7Q6UYE1 221 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 PRSS41Q7RTY9 318 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 ARHGAP22Q7Z5H3 698 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CAMKMTQ7Z624 323 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 HPS6Q86YV9 775 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CLECL1Q8IZS7 167 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CA13Q8N1Q1 262 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 ZCCHC7Q8N3Z6 543 aaKnown RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 RNF148Q8N7C7 305 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 ZNF611Q8N823 705 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 TTC29Q8NA56 475 aaPredicted RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 OR8J2Q8NGG1 315 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 OR5T3Q8NGG3 340 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 OR1L3Q8NH93 324 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 OR5P2Q8WZ92 322 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CCDC124Q96CT7 223 aaKnown RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 MMABQ96EY8 250 aaPredicted RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 AURKBQ96GD4 344 aaPredicted RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 C10orf90Q96M02 699 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 ZNF285Q96NJ3 590 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CCDC115Q96NT0 180 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 FOXN4Q96NZ1 517 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 GBP5Q96PP8 586 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 PANX1Q96RD7 426 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CGREF1Q99674 301 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 SH3GL1Q99961 368 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 ECSITQ9BQ95 431 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 GPATCH1Q9BRR8 931 aaKnown RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 THUMPD3Q9BV44 507 aaKnown RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 SLC7A5P2Q9GIP4 190 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 PAIP1Q9H074 479 aaKnown RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 MMADHCQ9H3L0 296 aaPredicted RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 RPF2Q9H7B2 306 aaKnown RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 NANOGQ9H9S0 305 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 FANCEQ9HB96 536 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 LYRM4Q9HD34 91 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 SLC35C2Q9NQQ7 365 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 FGF21Q9NSA1 209 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 SLC6A13Q9NSD5 602 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CUTCQ9NTM9 273 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 PLCXD1Q9NUJ7 323 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 GIMAP4Q9NUV9 329 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 CMTM6Q9NX76 183 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 PDP2Q9P2J9 529 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 PHF11Q9UIL8 331 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 BTNL2Q9UIR0 455 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 PSME2Q9UL46 239 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 PRPF19Q9UMS4 504 aaKnown RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 ENTPD4Q9Y227 616 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 ZNF780BQ9Y6R6 833 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 SPACA6W5XKT8 324 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 TNRC6BQ9UPQ9 1833 aaKnown RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 TMEM131Q92545 1883 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 MYO15AQ9UKN7 3530 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 KNTC1P50748 2209 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 PCDH15Q96QU1 1955 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 SCN3AQ9NY46 2000 aa3.48□□□□□ -1.85
CLK4-207ENST00000520909 NUP214P35658 2090 aaPredicted RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 MDC1Q14676 2089 aaKnown RBP3.48□□□□□ -1.85
CLK4-207ENST00000520909 C15orf38-AP3S2A0A0A6YYH1 394 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 TEX13CA0A0J9YWL9 993 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 EFCAB7A8K855 629 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 A8MUI8 341 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 EVPLLA8MZ36 301 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 D6RAR5 112 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 NME4O00746 187 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 ZNF749O43361 778 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 B4GALT2O60909 372 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 SCN2BO60939 215 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 LRP3O75074 770 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 GMNNO75496 209 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 NSA2O95478 260 aaKnown RBP3.47□□□□□ -1.85
CLK4-207ENST00000520909 STAMBPO95630 424 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 TPOP07202 933 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 GP1BAP07359 652 aa3.47□□□□□ -1.85
CLK4-207ENST00000520909 HOXB5P09067 269 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms