RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 FCRLAQ7L513 359 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 EPHX4Q8IUS5 362 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 CBR4Q8N4T8 237 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 OR52L1Q8NGH7 329 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 RNF128Q8TEB7 428 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
SDC2-203ENST00000519587 UCN2Q96RP3 112 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 TRIB1Q96RU8 372 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 TM9SF2Q99805 663 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 TACO1Q9BSH4 297 aaKnown RBP12.65□□□□□ -0.38
SDC2-203ENST00000519587 PAPOLBQ9NRJ5 636 aaKnown RBP12.65□□□□□ -0.38
SDC2-203ENST00000519587 EMC3Q9P0I2 261 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 CLCF1Q9UBD9 225 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 HIF3AQ9Y2N7 669 aa12.65□□□□□ -0.38
SDC2-203ENST00000519587 TRAV27A0A087WT01 109 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 A0A1W2PNV4 684 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 LRRN3E7EW58 273 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 CDC42EP2O14613 210 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 EI24O14681 340 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 CASQ2O14958 399 aaPredicted RBP12.64□□□□□ -0.39
SDC2-203ENST00000519587 SMAD9O15198 467 aaKnown RBP12.64□□□□□ -0.39
SDC2-203ENST00000519587 NDUFB2O95178 105 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 PLGP00747 810 aaPredicted RBP12.64□□□□□ -0.39
SDC2-203ENST00000519587 GASTP01350 101 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 POU2F1P14859 743 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 PRKACGP22612 351 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 ALDH3A2P51648 485 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 RAD23AP54725 363 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 H3F3AP84243 136 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 RFX4Q33E94 735 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 TMEM225Q6GV28 225 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 OR2A2Q6IF42 318 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 B3GNT6Q6ZMB0 384 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 ZNF620Q6ZNG0 422 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 HDDC2Q7Z4H3 204 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 ADGRE4PQ86SQ3 457 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 MEX3DQ86XN8 651 aaKnown RBP12.64□□□□□ -0.39
SDC2-203ENST00000519587 PARP8Q8N3A8 854 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 LRRC17Q8N6Y2 441 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 PACRGLQ8N7B6 248 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 CLDN22Q8N7P3 220 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 TMEM99Q8N816 258 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 ANKK1Q8NFD2 765 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 FNDC9Q8TBE3 224 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 TEX47Q8TBZ9 253 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 WNT2BQ93097 391 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 ZFP3Q96NJ6 502 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 SF3B5Q9BWJ5 86 aaKnown RBP12.64□□□□□ -0.39
SDC2-203ENST00000519587 GP6Q9HCN6 339 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 GLRX2Q9NS18 164 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 TBC1D23Q9NUY8 699 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 USE1Q9NZ43 259 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 NKX1-2Q9UD57 310 aaPredicted RBP12.64□□□□□ -0.39
SDC2-203ENST00000519587 SIGLEC7Q9Y286 467 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 NOX1Q9Y5S8 564 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 CDH10Q9Y6N8 788 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 NBASA2RRP1 2371 aa12.64□□□□□ -0.39
SDC2-203ENST00000519587 MYO9AB2RTY4 2548 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 PHF3Q92576 2039 aaKnown RBP12.63□□□□□ -0.39
SDC2-203ENST00000519587 IGHV3-15A0A0B4J1V0 119 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 A0A1W2PRG6 482 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 BLOC1S5-TXNDC5H3BN57 136 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 PDLIM1O00151 329 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 PLPP3O14495 311 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 GPR171O14626 319 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 RNF13O43567 381 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 AKAP8O43823 692 aaKnown RBP12.63□□□□□ -0.39
SDC2-203ENST00000519587 CYTIPO60759 359 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 PEX2P28328 305 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 SLC6A6P31641 620 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 UQCRC1P31930 480 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 RPL4P36578 427 aaKnown RBP12.63□□□□□ -0.39
SDC2-203ENST00000519587 PPP2R2BQ00005 443 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 LTBQ06643 244 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 RPL18Q07020 188 aaKnown RBP12.63□□□□□ -0.39
SDC2-203ENST00000519587 C1DQ13901 141 aaKnown RBP12.63□□□□□ -0.39
SDC2-203ENST00000519587 ALG10Q5BKT4 473 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 EMC4Q5J8M3 183 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 OGFRL1Q5TC84 451 aaPredicted RBP12.63□□□□□ -0.39
SDC2-203ENST00000519587 KDM4DQ6B0I6 523 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 SMARCD3Q6STE5 483 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 RASSF6Q6ZTQ3 369 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 GPAT4Q86UL3 456 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 UEVLDQ8IX04 471 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 OR51A7Q8NH64 312 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 OXGR1Q96P68 337 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 NIPSNAP1Q9BPW8 284 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 TEX12Q9BXU0 123 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 RASSF4Q9H2L5 321 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 MAGED1Q9Y5V3 778 aaPredicted RBP12.63□□□□□ -0.39
SDC2-203ENST00000519587 POLEQ07864 2286 aa12.63□□□□□ -0.39
SDC2-203ENST00000519587 DOCK7Q96N67 2140 aa12.62□□□□□ -0.39
SDC2-203ENST00000519587 FLNCQ14315 2725 aa12.62□□□□□ -0.39
SDC2-203ENST00000519587 TRGV8A0A0C4DH27 118 aa12.62□□□□□ -0.39
SDC2-203ENST00000519587 LOC102725191A0A1B0GVB3 256 aa12.62□□□□□ -0.39
SDC2-203ENST00000519587 H3BN98 237 aa12.62□□□□□ -0.39
SDC2-203ENST00000519587 SOCS2O14508 198 aa12.62□□□□□ -0.39
SDC2-203ENST00000519587 ZNHIT1O43257 154 aa12.62□□□□□ -0.39
SDC2-203ENST00000519587 ALPLP05186 524 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms