RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 ANKRD16Q6P6B7 361 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 ULK3Q6PHR2 472 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 CLEC2AQ6UVW9 174 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 ADPRHL1Q8NDY3 354 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 BCL2L2Q92843 193 aaPredicted RBP13.78□□□□□ -0.2
MRPS28-204ENST00000519120 OXGR1Q96P68 337 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 ZNF607Q96SK3 696 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 KATNB1Q9BVA0 655 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 RSPO3Q9BXY4 272 aaPredicted RBP13.78□□□□□ -0.2
MRPS28-204ENST00000519120 RABEP2Q9H5N1 569 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 SLAMF8Q9P0V8 285 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 B3GAT1Q9P2W7 334 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 CRNNQ9UBG3 495 aaPredicted RBP13.78□□□□□ -0.2
MRPS28-204ENST00000519120 ATP23Q9Y6H3 246 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 PMF1-BGLAPU3KQ54 211 aa13.78□□□□□ -0.2
MRPS28-204ENST00000519120 TRAV36DV7A0A075B6V5 113 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 A0A096LNT2 108 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 AIM2O14862 343 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 LGI1O95970 557 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 CSF3P09919 207 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 PTNP21246 168 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 SLC6A2P23975 617 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 HTR2AP28223 471 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 UBE2NP61088 152 aaKnown RBP13.77□□□□□ -0.21
MRPS28-204ENST00000519120 HOXC5Q00444 222 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 ALG10BQ5I7T1 473 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 SWT1Q5T5J6 900 aaKnown RBP13.77□□□□□ -0.21
MRPS28-204ENST00000519120 HMBOX1Q6NT76 420 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 LSRQ86X29 649 aaPredicted RBP13.77□□□□□ -0.21
MRPS28-204ENST00000519120 C10orf111Q8N326 155 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 MAPK1IP1LQ8NDC0 245 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 DYDC1Q8WWB3 177 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 SLC25A36Q96CQ1 311 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 SLC47A1Q96FL8 570 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 ALKBH3Q96Q83 286 aaPredicted RBP13.77□□□□□ -0.21
MRPS28-204ENST00000519120 SLC38A2Q96QD8 506 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 PLCE1Q9P212 2302 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 CORINQ9Y5Q5 1042 aa13.77□□□□□ -0.21
MRPS28-204ENST00000519120 IGKV1D-42A0A075B6H8 117 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 IGHV4-30-2A0A087WSY4 118 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 A0A087WUJ7 227 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 IGHV1-18A0A0C4DH31 117 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 ATP6V1G2-DDX39BF2Z307 99 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 M0R082 166 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 AKAP8O43823 692 aaKnown RBP13.76□□□□□ -0.21
MRPS28-204ENST00000519120 SLC43A1O75387 559 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 SERPINB7O75635 380 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 PDE5AO76074 875 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 IGLV1-44P01699 117 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 SLC25A16P16260 332 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 CDH2P19022 906 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-204ENST00000519120 EFNA4P52798 201 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 NCALDP61601 193 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 ROR2Q01974 943 aaKnown RBP13.76□□□□□ -0.21
MRPS28-204ENST00000519120 LOXL1Q08397 574 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-204ENST00000519120 SCARB2Q14108 478 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 ADRM1Q16186 407 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 SWI5Q1ZZU3 235 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 AGKQ53H12 422 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 TTMPQ5BVD1 217 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 DLEU7Q6UYE1 221 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 H1FNTQ75WM6 255 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-204ENST00000519120 LINGO2Q7L985 606 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 HIPK4Q8NE63 616 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 ZNF417Q8TAU3 575 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 TSPEARQ8WU66 669 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 TAAR8Q969N4 342 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 SLC41A3Q96GZ6 507 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 ZNF587Q96SQ5 575 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-204ENST00000519120 EPYCQ99645 322 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 CPPED1Q9BRF8 314 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-204ENST00000519120 NELFAQ9H3P2 528 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 INTS9Q9NV88 658 aaKnown RBP13.76□□□□□ -0.21
MRPS28-204ENST00000519120 KLHL14Q9P2G3 628 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 MOKQ9UQ07 419 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 JMJD1CQ15652 2540 aa13.76□□□□□ -0.21
MRPS28-204ENST00000519120 CR1P17927 2039 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 HMGB1P1B2RPK0 211 aaPredicted RBP13.75□□□□□ -0.21
MRPS28-204ENST00000519120 TPST1O60507 370 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 UPK3AO75631 287 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 IGKV3-15P01624 115 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 CRYAAP02489 173 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 CLDN17P56750 224 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 RGS8P57771 180 aaPredicted RBP13.75□□□□□ -0.21
MRPS28-204ENST00000519120 LGALS3BPQ08380 585 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 RBBP4Q09028 425 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 C1DQ13901 141 aaKnown RBP13.75□□□□□ -0.21
MRPS28-204ENST00000519120 GLIPR1L2Q4G1C9 344 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 COMTD1Q86VU5 262 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 CCDC36Q8IYA8 594 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 KDM8Q8N371 416 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 DPP10Q8N608 796 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 SCAIQ8N9R8 606 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 PIK3C3Q8NEB9 887 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 KCNS3Q9BQ31 491 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 IKZF5Q9H5V7 419 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 TMEM27Q9HBJ8 222 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 SELENONQ9NZV5 590 aa13.75□□□□□ -0.21
MRPS28-204ENST00000519120 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.75□□□□□ -0.21
MRPS28-204ENST00000519120 LEF1Q9UJU2 399 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms