RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 NME6O75414 186 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 TRMUO75648 421 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ANGPTL1O95841 491 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 IFNA14P01570 189 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 IFNW1P05000 195 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 CCDC159P0C7I6 412 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 C8orf89P0DMQ9 161 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 POLR2CP19387 275 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ITIH1P19827 911 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 BDKRB2P30411 391 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 GGT2P36268 569 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ATP6V1E1P36543 226 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 FEN1P39748 380 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 MAP2K4P45985 399 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 RABIFP47224 123 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 GSSP48637 474 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 CCT3P49368 545 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ENTPD1P49961 510 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 NUP107P57740 925 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ZP1P60852 638 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 STXBP1P61764 594 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 RPP38P78345 283 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 SLC35A2P78381 396 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 BTN3A2P78410 334 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 IL1RL1Q01638 556 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 TNFRSF17Q02223 184 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 RBPJQ06330 500 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 RGS1Q08116 209 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ILF3Q12906 894 aaKnown RBP eCLIP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 NPRL3Q12980 569 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 AQP6Q13520 282 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 FHL2Q14192 279 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 GANABQ14697 944 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 LASP1Q14847 261 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 DAZAP2Q15038 168 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 EFNB3Q15768 340 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 NPTX1Q15818 432 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 SYPL1Q16563 259 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 CTF1Q16619 201 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 DUSP7Q16829 419 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 MICAQ29983 383 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ZNF542PQ5EBM4 170 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 GPR107Q5VW38 600 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 FRMPD2BQ6IN97 320 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ZNF770Q6IQ21 691 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 SLC18B1Q6NT16 456 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 FIGLAQ6QHK4 219 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 TMEM107Q6UX40 140 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 PRSS41Q7RTY9 318 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 HMGN2P46Q86SG4 172 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 RBM45Q8IUH3 476 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 MAML2Q8IZL2 1156 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 Q8N1X5 172 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 TBC1D19Q8N5T2 526 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 C10orf53Q8N6V4 93 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 BPIFB6Q8NFQ5 453 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 OR9A2Q8NGT5 310 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 OR52J3Q8NH60 311 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 OR10G6Q8NH81 332 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 BBS10Q8TAM1 723 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ZNF420Q8TAQ5 688 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 SLC37A2Q8TED4 501 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ROBO4Q8WZ75 1007 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 LZICQ8WZA0 190 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 DPF1Q92782 380 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 TAAR8Q969N4 342 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 GIMAP5Q96F15 307 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 C16orf58Q96GQ5 468 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 COL21A1Q96P44 957 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 OR2A5Q96R48 311 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 FEVQ99581 238 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 NIPSNAP1Q9BPW8 284 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 TUBA1CQ9BQE3 449 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 LRRC61Q9BV99 259 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 QTRT1Q9BXR0 403 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 DUSP21Q9H596 190 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ANKRA2Q9H9E1 313 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 CXorf21Q9HAI6 301 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 NMNAT1Q9HAN9 279 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ZCCHC3Q9NUD5 404 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ACER3Q9NUN7 267 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 POT1Q9NUX5 634 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ZNF226Q9NYT6 803 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ERVK-18Q9QC07 812 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 RHCGQ9UBD6 479 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 P2RX2Q9UBL9 471 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 TINAGQ9UJW2 476 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ACAD8Q9UKU7 415 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 BLOC1S6Q9UL45 172 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 ENTPD4Q9Y227 616 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 RNF6Q9Y252 685 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 DMRT1Q9Y5R6 373 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 KCNE3Q9Y6H6 103 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 HSPE1-MOB4S4R3N1 261 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 TRIOBPQ9H2D6 2365 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 DSPPQ9NZW4 1301 aa4.36□□□□□ -1.71
CTNNA1-212ENST00000518919 PRUNE2Q8WUY3 3088 aa4.35□□□□□ -1.71
CTNNA1-212ENST00000518919 A0A087WV48 116 aa4.35□□□□□ -1.71
CTNNA1-212ENST00000518919 A0A0G2JNG1 304 aa4.35□□□□□ -1.71
CTNNA1-212ENST00000518919 SPTY2D1-AS1A0A0U1RR47 76 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms