RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 GPNMBQ14956 572 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 DGUOKQ16854 277 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 GPR157Q5UAW9 335 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 C6orf89Q6UWU4 347 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 PAQR7Q86WK9 346 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 RALGPS2Q86X27 583 aaPredicted RBP2.93□□□□□ -1.94
SQLE-202ENST00000518604 EIF1ADQ8N9N8 165 aaKnown RBP2.93□□□□□ -1.94
SQLE-202ENST00000518604 OR9G1Q8NH87 305 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 NDRG1Q92597 394 aaKnown RBP2.93□□□□□ -1.94
SQLE-202ENST00000518604 ARPC1AQ92747 370 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 LINC00167Q96N53 147 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 SECISBP2Q96T21 854 aaKnown RBP2.93□□□□□ -1.94
SQLE-202ENST00000518604 ZBTB18Q99592 522 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 SDHCQ99643 169 aaPredicted RBP2.93□□□□□ -1.94
SQLE-202ENST00000518604 RIOK1Q9BRS2 568 aaKnown RBP2.93□□□□□ -1.94
SQLE-202ENST00000518604 SLC25A39Q9BZJ4 359 aaPredicted RBP2.93□□□□□ -1.94
SQLE-202ENST00000518604 ACTR6Q9GZN1 396 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 GBA3Q9H227 469 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 QPCTLQ9NXS2 382 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 CLEC4AQ9UMR7 237 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 PIGLQ9Y2B2 252 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 FAM240BA0A1B0GVZ2 78 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 A0A1W2PNU3 283 aaPredicted RBP2.92□□□□□ -1.94
SQLE-202ENST00000518604 C12orf71A8MTZ7 269 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 SLC31A2O15432 143 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 TIMM8AO60220 97 aaPredicted RBP2.92□□□□□ -1.94
SQLE-202ENST00000518604 FCMRO60667 390 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 SURF6O75683 361 aaKnown RBP2.92□□□□□ -1.94
SQLE-202ENST00000518604 IL1BP01584 269 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 PSG2P11465 335 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 RCC1P18754 421 aaPredicted RBP2.92□□□□□ -1.94
SQLE-202ENST00000518604 CD1CP29017 333 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 ATP1B3P54709 279 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 CDK16Q00536 496 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 MECOMQ03112 1051 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 CYB5R2Q6BCY4 276 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 CTRB2Q6GPI1 263 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 ACP7Q6ZNF0 438 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 ZNF620Q6ZNG0 422 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 MFSD6LQ8IWD5 586 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 Q8N9L7 120 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 RDH5Q92781 318 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 FGF14Q92915 247 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 ZNF641Q96N77 438 aaPredicted RBP2.92□□□□□ -1.94
SQLE-202ENST00000518604 OR2M2Q96R28 347 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 FN3KRPQ9HA64 309 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 SIAEQ9HAT2 523 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 SGK2Q9HBY8 427 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 EML4Q9HC35 981 aaKnown RBP2.92□□□□□ -1.94
SQLE-202ENST00000518604 HOXC10Q9NYD6 342 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 COX16Q9P0S2 106 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 SLC25A15Q9Y619 301 aa2.92□□□□□ -1.94
SQLE-202ENST00000518604 LTBP1Q14766 1721 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 HOXC4P09017 264 aaPredicted RBP2.91□□□□□ -1.94
SQLE-202ENST00000518604 GIPP09681 153 aaPredicted RBP2.91□□□□□ -1.94
SQLE-202ENST00000518604 ZNF853P0CG23 659 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 PNMA6AP0CW24 399 aaPredicted RBP2.91□□□□□ -1.94
SQLE-202ENST00000518604 NCK1P16333 377 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 CDH4P55283 916 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 SCRN3Q0VDG4 424 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 PLD1Q13393 1074 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 CYTH1Q15438 398 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 IMMTQ16891 758 aaKnown RBP2.91□□□□□ -1.94
SQLE-202ENST00000518604 C6orf120Q7Z4R8 191 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 DHDDSQ86SQ9 333 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 ZNF546Q86UE3 836 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 ZNF429Q86V71 674 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 ECHDC2Q86YB7 292 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 TGIF2LXQ8IUE1 241 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 MDS2Q8NDY4 140 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 NPBQ8NG41 125 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 OR1N2Q8NGR9 330 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 PYROXD1Q8WU10 500 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 SRSF12Q8WXF0 261 aaKnown RBP2.91□□□□□ -1.94
SQLE-202ENST00000518604 IFT74Q96LB3 600 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 NPY6RQ99463 290 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 DEFB127Q9H1M4 99 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 ZNF331Q9NQX6 463 aaPredicted RBP2.91□□□□□ -1.94
SQLE-202ENST00000518604 EXD2Q9NVH0 621 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 CLCF1Q9UBD9 225 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 NEU3Q9UQ49 428 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 TP53TG5Q9Y2B4 290 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 NPTNQ9Y639 398 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 PDS5BQ9NTI5 1447 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 ASTN1O14525 1302 aa2.91□□□□□ -1.94
SQLE-202ENST00000518604 CDC42BPBQ9Y5S2 1711 aa2.9□□□□□ -1.94
SQLE-202ENST00000518604 TRBV6-6A0A0A6YYG2 114 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 A6NDX4 124 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 FAM166BA8MTA8 275 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 C12orf77C9JDV5 145 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 CXCL11O14625 94 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 MMP1P03956 469 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 FGF1P05230 155 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 ADRB3P13945 408 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 HSD17B2P37059 387 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 FDFT1P37268 417 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 YAP1P46937 504 aaKnown RBP2.9□□□□□ -1.95
SQLE-202ENST00000518604 GYG1P46976 350 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 UCNP55089 124 aa2.9□□□□□ -1.95
SQLE-202ENST00000518604 RPL23AP62750 156 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms