RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	GID8	Q9NWU2	228 aa		3.69	□□□□□ -1.82
RUFY3-215	ENST00000515479	CRNN	Q9UBG3	495 aa	Predicted RBP	3.69	□□□□□ -1.82
RUFY3-215	ENST00000515479	LSM7	Q9UK45	103 aa	Known RBP	3.69	□□□□□ -1.82
RUFY3-215	ENST00000515479	APPL1	Q9UKG1	709 aa		3.69	□□□□□ -1.82
RUFY3-215	ENST00000515479	CLEC4E	Q9ULY5	219 aa		3.69	□□□□□ -1.82
RUFY3-215	ENST00000515479	RABL2B	Q9UNT1	228 aa		3.69	□□□□□ -1.82
RUFY3-215	ENST00000515479	NCKAP1	Q9Y2A7	1128 aa		3.69	□□□□□ -1.82
RUFY3-215	ENST00000515479	CMAHP	Q9Y471	501 aa		3.69	□□□□□ -1.82
RUFY3-215	ENST00000515479	MED13	Q9UHV7	2174 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	LRBA	P50851	2863 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	TDRD6	O60522	2096 aa	Known RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	CENPBD1	B2RD01	187 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	TMX2-CTNND1	H3BSU7	103 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479		K7EPI3	171 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	MANBA	O00462	879 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	EI24	O14681	340 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	KMO	O15229	486 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	H6PD	O95479	791 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	STAMBP	O95630	424 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	CPNE6	O95741	557 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	OXSR1	O95747	527 aa	Predicted RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SEMA4F	O95754	770 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	HPR	P00739	348 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	DNTT	P04053	509 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	GNAO1	P09471	354 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	MPC1L	P0DKB6	136 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	M6PR	P20645	277 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	HLA-F	P30511	346 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	HMOX2	P30519	316 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	S100A5	P33763	92 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	NSG1	P42857	185 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	STK19	P49842	368 aa	Predicted RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	CAMP	P49913	170 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	GZMM	P51124	257 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	NME5	P56597	212 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	NUP107	P57740	925 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	KRTAP12-2	P59991	146 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	BCL2L1	Q07817	233 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	HSPA14	Q0VDF9	509 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	EIF3I	Q13347	325 aa	Known RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	ABRAXAS2	Q15018	415 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	CHRNA6	Q15825	494 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	NRF1	Q16656	503 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	TTLL9	Q3SXZ7	439 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SLC36A3	Q495N2	470 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	ZNF658B	Q4V348	819 aa	Predicted RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	LRRC66	Q68CR7	880 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	PTRHD1	Q6GMV3	140 aa	Known RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SULT1C3	Q6IMI6	304 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	NANOGP8	Q6NSW7	305 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	NIPAL1	Q6NVV3	410 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	MBOAT1	Q6ZNC8	495 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	TAS2R42	Q7RTR8	314 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	CALHM3	Q86XJ0	350 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	TBC1D21	Q8IYX1	336 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SLC7A5P1	Q8MH63	180 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	TCAIM	Q8N3R3	496 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	CBR4	Q8N4T8	237 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SPERT	Q8NA61	448 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	FNDC5	Q8NAU1	212 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	GPR26	Q8NDV2	337 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	TRPV3	Q8NET8	790 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	OR6K2	Q8NGY2	324 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	WDR36	Q8NI36	951 aa	Known RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	ADAMTS16	Q8TE57	1224 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SAP25	Q8TEE9	199 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	TESC	Q96BS2	214 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	ULK4	Q96C45	1275 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	ERLEC1	Q96DZ1	483 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	RMND5B	Q96G75	393 aa	Predicted RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	HBEGF	Q99075	208 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	C9orf16	Q9BUW7	83 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	DGCR6L	Q9BY27	220 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	ACPT	Q9BZG2	426 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	GABARAPL1	Q9H0R8	117 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	RSPH9	Q9H1X1	276 aa	Predicted RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	IKZF5	Q9H5V7	419 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	ASB8	Q9H765	288 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	NOL11	Q9H8H0	719 aa	Known RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	NANOG	Q9H9S0	305 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	IL1RL2	Q9HB29	575 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	NTN4	Q9HB63	628 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	ZDHHC4	Q9NPG8	344 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	ASCL3	Q9NQ33	180 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SPHK2	Q9NRA0	654 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	OLAH	Q9NV23	265 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SMPD3	Q9NY59	655 aa	Predicted RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SLC25A37	Q9NYZ2	338 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	VAPA	Q9P0L0	249 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	OPTC	Q9UBM4	332 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	ZMAT5	Q9UDW3	170 aa	Known RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	EPHA6	Q9UF33	1036 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	CRLS1	Q9UJA2	301 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SCML1	Q9UN30	329 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	PRELID1	Q9Y255	219 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	N6AMT1	Q9Y5N5	214 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	RP1L1	Q8IWN7	2480 aa	Predicted RBP	3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	NBAS	A2RRP1	2371 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SCN3A	Q9NY46	2000 aa		3.68	□□□□□ -1.82
RUFY3-215	ENST00000515479	SETD2	Q9BYW2	2564 aa	Predicted RBP	3.67	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms