RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 SMPD2O60906 423 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 LYPD3O95274 346 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 BGLAPP02818 100 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 COX4I1P13073 169 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 HOXC12P31275 282 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 OR1E2P47887 323 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 C1DQ13901 141 aaKnown RBP10.09□□□□□ -0.79
VCAN-212ENST00000515397 MAPRE2Q15555 327 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 MS4A18Q3C1V0 323 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 TIMM23BQ5SRD1 257 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 FAM69AQ5T7M9 428 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 C6orf89Q6UWU4 347 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 H1FNTQ75WM6 255 aaPredicted RBP10.09□□□□□ -0.79
VCAN-212ENST00000515397 CARM1Q86X55 608 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 OR8J3Q8NGG0 315 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 TMEM45BQ96B21 275 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 ZNF837Q96EG3 531 aaPredicted RBP10.09□□□□□ -0.79
VCAN-212ENST00000515397 MUS81Q96NY9 551 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 ALKBH3Q96Q83 286 aaPredicted RBP10.09□□□□□ -0.79
VCAN-212ENST00000515397 SMR3AQ99954 134 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 TMUB1Q9BVT8 246 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 SLCO5A1Q9H2Y9 848 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 ESRP2Q9H6T0 727 aaKnown RBP10.09□□□□□ -0.79
VCAN-212ENST00000515397 NGBQ9NPG2 151 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 BEX4Q9NWD9 120 aaPredicted RBP10.09□□□□□ -0.79
VCAN-212ENST00000515397 GID8Q9NWU2 228 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 B3GAT1Q9P2W7 334 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 SLC7A7Q9UM01 511 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 SLC25A15Q9Y619 301 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 BBIP1A8MTZ0 92 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 C11orf98E9PRG8 122 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 ABCD4O14678 606 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 ATP8B1O43520 1251 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 OR2T1O43869 369 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 SEC14L2O76054 403 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 VAMP5O95183 116 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 CNOT4O95628 575 aaKnown RBP10.08□□□□□ -0.8
VCAN-212ENST00000515397 CH25HO95992 272 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 SOD3P08294 240 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 NQO1P15559 274 aaKnown RBP10.08□□□□□ -0.8
VCAN-212ENST00000515397 ZNF43P17038 809 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 DRD4P21917 467 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 MPGP29372 298 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 YAP1P46937 504 aaKnown RBP10.08□□□□□ -0.8
VCAN-212ENST00000515397 LRRC23Q53EV4 343 aaPredicted RBP10.08□□□□□ -0.8
VCAN-212ENST00000515397 PHYHD1Q5SRE7 291 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 INTS11Q5TA45 600 aaKnown RBP10.08□□□□□ -0.8
VCAN-212ENST00000515397 FAM91A1Q658Y4 838 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 DEF8Q6ZN54 512 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 Q71RC1 249 aaPredicted RBP10.08□□□□□ -0.8
VCAN-212ENST00000515397 CCDC80Q76M96 950 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 SPATA21Q7Z572 469 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 LRRC17Q8N6Y2 441 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 PCYOX1LQ8NBM8 494 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 BHLHE22Q8NFJ8 381 aaPredicted RBP10.08□□□□□ -0.8
VCAN-212ENST00000515397 ADAMTS16Q8TE57 1224 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 PIGTQ969N2 578 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 OXGR1Q96P68 337 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 SH3GL1Q99961 368 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 C12orf10Q9HB07 376 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 SLC17A5Q9NRA2 495 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 MED29Q9NX70 200 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 PRDM4Q9UKN5 801 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 PLCE1Q9P212 2302 aa10.08□□□□□ -0.8
VCAN-212ENST00000515397 CSPG4Q6UVK1 2322 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 C2CD3Q4AC94 2353 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 SHISA9B4DS77 424 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 C8BP07358 591 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 FUT4P22083 530 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 AHCYP23526 432 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 KDELR2P33947 212 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 ROR2Q01974 943 aaKnown RBP10.07□□□□□ -0.8
VCAN-212ENST00000515397 LIPEQ05469 1076 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 PMS2P3Q13401 168 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 PIN1Q13526 163 aaPredicted RBP10.07□□□□□ -0.8
VCAN-212ENST00000515397 ZNF672Q499Z4 452 aaPredicted RBP10.07□□□□□ -0.8
VCAN-212ENST00000515397 CYBRD1Q53TN4 286 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 COQ5Q5HYK3 327 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 Q5PR19 223 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 SLC22A25Q6T423 547 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 LINC00114Q6XXX2 140 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 C20orf204Q6ZNR8 217 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 P2RY8Q86VZ1 359 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 NKAIN4Q8IVV8 208 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 SLC30A8Q8IWU4 369 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 SLC15A3Q8IY34 581 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 CIARTQ8N365 385 aaPredicted RBP10.07□□□□□ -0.8
VCAN-212ENST00000515397 ZNF611Q8N823 705 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 POMGNT2Q8NAT1 580 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 OR2T12Q8NG77 320 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 RP9Q8TA86 221 aaKnown RBP10.07□□□□□ -0.8
VCAN-212ENST00000515397 SMAP2Q8WU79 429 aaPredicted RBP10.07□□□□□ -0.8
VCAN-212ENST00000515397 PROX1Q92786 737 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 SLC41A3Q96GZ6 507 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 TPD52L3Q96J77 140 aa10.07□□□□□ -0.8
VCAN-212ENST00000515397 CISD1Q9NZ45 108 aaKnown RBP10.07□□□□□ -0.8
VCAN-212ENST00000515397 ELOVL7A1L3X0 281 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 SLC35F4A4IF30 521 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 TRAPPC13A5PLN9 417 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 TRIM64A6NGJ6 449 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms