RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 TMEM88BA6NKF7 163 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 OR6C76A6NM76 312 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 F8VVB4 439 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 F8VWA3 439 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 NPIPB9F8W1W9 429 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 GPR37O15354 613 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 FADS1O60427 444 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 ADH1CP00326 375 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 HLA-GP17693 338 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 TAS2R38P59533 333 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 MEF2AQ02078 507 aaPredicted RBP11.77□□□□□ -0.52
SMAD1-215ENST00000515385 RAB33AQ14088 237 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 ZNF234Q14588 700 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 SSX2Q16385 188 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 NKPD1Q17RQ9 610 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 TP53I3Q53FA7 332 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 SSX9Q7RTT3 188 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 TMEM173Q86WV6 379 aaPredicted RBP11.77□□□□□ -0.52
SMAD1-215ENST00000515385 SLC30A7Q8NEW0 376 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 RBM18Q96H35 190 aaKnown RBP11.77□□□□□ -0.52
SMAD1-215ENST00000515385 HSPA12BQ96MM6 686 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 LRFN5Q96NI6 719 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 MS4A8Q9BY19 250 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 TUBA4BQ9H853 241 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 SFXN1Q9H9B4 322 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 TMEM27Q9HBJ8 222 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 FBXL4Q9UKA2 621 aa11.77□□□□□ -0.52
SMAD1-215ENST00000515385 PRKRAO75569 313 aaKnown RBP11.77□□□□□ -0.53
SMAD1-215ENST00000515385 IGHV2-5P01817 119 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 KLK3P07288 261 aaPredicted RBP11.77□□□□□ -0.53
SMAD1-215ENST00000515385 IRF1P10914 325 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 RPS2P15880 293 aaKnown RBP11.77□□□□□ -0.53
SMAD1-215ENST00000515385 CBR1P16152 277 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 CTSOP43234 321 aaPredicted RBP11.77□□□□□ -0.53
SMAD1-215ENST00000515385 RAB2AP61019 212 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 TLE2Q04725 743 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 CCINQ13939 588 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 TAF13Q15543 124 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 HMGN3Q15651 99 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 RPE65Q16518 533 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 PNLIPRP3Q17RR3 467 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 KLHL26Q53HC5 615 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 ACER2Q5QJU3 275 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 LCTLQ6UWM7 567 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 OLIG3Q7RTU3 272 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 FAM129CQ86XR2 697 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 VRK2Q86Y07 508 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF280BQ86YH2 543 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 DND1Q8IYX4 353 aaKnown RBP11.77□□□□□ -0.53
SMAD1-215ENST00000515385 CDK20Q8IZL9 346 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF433Q8N7K0 673 aaPredicted RBP11.77□□□□□ -0.53
SMAD1-215ENST00000515385 SDR9C7Q8NEX9 313 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 OR51S1Q8NGJ8 323 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 OR4C6Q8NH72 309 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 PAQR8Q8TEZ7 354 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 LINC01599Q8WXQ3 324 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 NEU1Q99519 415 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 NRIP2Q9BQI9 281 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 CHRDQ9H2X0 955 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 POFUT1Q9H488 388 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 SEC61A2Q9H9S3 476 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 POT1Q9NUX5 634 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 B4GALT6Q9UBX8 382 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF281Q9Y2X9 895 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF337Q9Y3M9 751 aa11.77□□□□□ -0.53
SMAD1-215ENST00000515385 TP53BP1Q12888 1972 aaPredicted RBP11.76□□□□□ -0.53
SMAD1-215ENST00000515385 WASH3PC4AMC7 463 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 SULT2B1O00204 365 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 PIN1P1O15428 100 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 FRS3O43559 492 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 VNN2O95498 520 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 NTN1O95631 604 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 IFNGP01579 166 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 THY1P04216 161 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 GTF2F2P13984 249 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 NFYBP25208 207 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 ITPKBP27987 946 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 NDUFS1P28331 727 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 SDHAP31040 664 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 RAB5CP51148 216 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 POLR2LP62875 67 aaKnown RBP11.76□□□□□ -0.53
SMAD1-215ENST00000515385 TMEM244Q5VVB8 128 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 SSX6Q7RTT6 188 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 HMGN2P46Q86SG4 172 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 NLGN2Q8NFZ4 835 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
SMAD1-215ENST00000515385 RPS4Y2Q8TD47 263 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 SNX33Q8WV41 574 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 KLK6Q92876 244 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 HIST1H2BAQ96A08 127 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF689Q96CS4 500 aaPredicted RBP11.76□□□□□ -0.53
SMAD1-215ENST00000515385 LRIG1Q96JA1 1093 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 POTEKPQ9BYX7 375 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 ACKR4Q9NPB9 350 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 ASH2LQ9UBL3 628 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 CD84Q9UIB8 345 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF223Q9UK11 482 aaPredicted RBP11.76□□□□□ -0.53
SMAD1-215ENST00000515385 SLC7A7Q9UM01 511 aa11.76□□□□□ -0.53
SMAD1-215ENST00000515385 TXNL1O43396 289 aa11.75□□□□□ -0.53
SMAD1-215ENST00000515385 CD74P04233 296 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms