RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ATP6V1G2O95670 118 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 TGM6O95932 706 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 POU2F1P14859 743 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 KLK2P20151 261 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 SLC16A1P53985 500 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 PPP2R2BQ00005 443 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 PUDPQ08623 228 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 ZP4Q12836 540 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 MRPL49Q13405 166 aaKnown RBP18.73■□□□□ 0.59
LSM6-207ENST00000515311 PDK3Q15120 406 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 TAF11Q15544 211 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 ZBED5Q49AG3 693 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 GTF2IRD2BQ6EKJ0 949 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 PPP4R4Q6NUP7 873 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 B3GNT6Q6ZMB0 384 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 GTF2IRD2Q86UP8 949 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 MBD3L2Q8NHZ7 208 aaPredicted RBP18.73■□□□□ 0.59
LSM6-207ENST00000515311 EME1Q96AY2 570 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 NIPSNAP1Q9BPW8 284 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 RBM4BQ9BQ04 359 aaKnown RBP18.73■□□□□ 0.59
LSM6-207ENST00000515311 RBM4Q9BWF3 364 aaKnown RBP18.73■□□□□ 0.59
LSM6-207ENST00000515311 SF3B5Q9BWJ5 86 aaKnown RBP18.73■□□□□ 0.59
LSM6-207ENST00000515311 UCK2Q9BZX2 261 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 GP6Q9HCN6 339 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 OSGIN2Q9Y236 505 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 DOCK7Q96N67 2140 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 TRAV27A0A087WT01 109 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 KDM4EB2RXH2 506 aaPredicted RBP18.72■□□□□ 0.59
LSM6-207ENST00000515311 PDLIM1O00151 329 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 PTP4A3O75365 173 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 ADORA3P0DMS8 318 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 DAPP51397 102 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 PRPS1P60891 318 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 POU4F3Q15319 338 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 TRIP10Q15642 601 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 KDM4DQ6B0I6 523 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 TMEM225Q6GV28 225 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 OR2A2Q6IF42 318 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 RPL13AP3Q6NVV1 102 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 ZNF620Q6ZNG0 422 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 RASSF6Q6ZTQ3 369 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 P4HA3Q7Z4N8 544 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 CCDC103Q8IW40 242 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 CBR4Q8N4T8 237 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 CLDN22Q8N7P3 220 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 OR51A7Q8NH64 312 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 OXGR1Q96P68 337 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 TNFRSF13CQ96RJ3 184 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 NDEL1Q9GZM8 345 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 MCCC2Q9HCC0 563 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 GLRX2Q9NS18 164 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 TAS2R5Q9NYW4 299 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 USE1Q9NZ43 259 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 KLHL9Q9P2J3 617 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 POFUT2Q9Y2G5 429 aa18.72■□□□□ 0.59
LSM6-207ENST00000515311 MED12LQ86YW9 2145 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 ZNF462Q96JM2 2506 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 IGKV3D-15A0A087WSY6 115 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 ZNF716A6NP11 495 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 E9PLN8 166 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 MS4A18H0YCH9 400 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 BLOC1S5-TXNDC5H3BN57 136 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 RAMP1O60894 148 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 RCBTB2O95199 551 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 ALPLP05186 524 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 TIMP3P35625 211 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 RPL18Q07020 188 aaKnown RBP18.71■□□□□ 0.59
LSM6-207ENST00000515311 DAG1Q14118 895 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 SLC17A1Q14916 467 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 IGFBP7Q16270 282 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 MS4A18Q3C1V0 323 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 SMARCD3Q6STE5 483 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 KLHL17Q6TDP4 642 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 PLXDC2Q6UX71 529 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 PXKQ7Z7A4 578 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 PARP8Q8N3A8 854 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 FANK1Q8TC84 345 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 ABHD3Q8WU67 409 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 ZFP3Q96NJ6 502 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 VKORC1Q9BQB6 163 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 TTYH2Q9BSA4 534 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 TACO1Q9BSH4 297 aaKnown RBP18.71■□□□□ 0.59
LSM6-207ENST00000515311 SMURF2Q9HAU4 748 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 C8orf4Q9NR00 106 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 PAPOLBQ9NRJ5 636 aaKnown RBP18.71■□□□□ 0.59
LSM6-207ENST00000515311 B3GAT1Q9P2W7 334 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 RALYQ9UKM9 306 aaKnown RBP18.71■□□□□ 0.59
LSM6-207ENST00000515311 NOX1Q9Y5S8 564 aa18.71■□□□□ 0.59
LSM6-207ENST00000515311 TRGV8A0A0C4DH27 118 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 EI24O14681 340 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 NDUFB2O95178 105 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 HPRP00739 348 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 GLI4P10075 376 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 AQP2P41181 271 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 ALDH3A2P51648 485 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 RASGEF1BQ0VAM2 473 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 EIF2S3LQ2VIR3 472 aaKnown RBP18.7■□□□□ 0.58
LSM6-207ENST00000515311 C3P1Q6ZMU1 363 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 ZBTB49Q6ZSB9 765 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 SEM1Q6ZVN7 128 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms