RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 VAMP5O95183 116 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 THY1P04216 161 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 ZNF43P17038 809 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 C5orf46Q6UWT4 87 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 WDR88Q6ZMY6 472 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 LINGO2Q7L985 606 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 C10orf53Q8N6V4 93 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 ZNF611Q8N823 705 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 POMGNT2Q8NAT1 580 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 PCYOX1LQ8NBM8 494 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 MUS81Q96NY9 551 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 SH3GL1Q99961 368 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 AMBRA1Q9C0C7 1298 aa16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 GMPR2Q9P2T1 348 aaKnown RBP16.6■□□□□ 0.25
LPCAT1-206ENST00000514484 M0R1B8 84 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 OR2T1O43869 369 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 SHOX2O60902 331 aaPredicted RBP16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 UPK3AO75631 287 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 HPRP00739 348 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 BGLAPP02818 100 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 C8BP07358 591 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 MPGP29372 298 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 LTBQ06643 244 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 ZNF672Q499Z4 452 aaPredicted RBP16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 HIKESHIQ53FT3 197 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 OR7E24Q6IFN5 339 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 ZNF613Q6PF04 617 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 CCDC80Q76M96 950 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 PIAS4Q8N2W9 510 aaPredicted RBP16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 WDR31Q8NA23 367 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 ADAMTS16Q8TE57 1224 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 TMEM171Q8WVE6 324 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 IGFBPL1Q8WX77 278 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 FBXW5Q969U6 566 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 ZNF583Q96ND8 569 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 OXGR1Q96P68 337 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 FAM107BQ9H098 131 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 EVA1AQ9H8M9 152 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 SLC17A5Q9NRA2 495 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 GID8Q9NWU2 228 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 LAMP3Q9UQV4 416 aa16.59■□□□□ 0.25
LPCAT1-206ENST00000514484 ZFHX3Q15911 3703 aa16.58■□□□□ 0.25
LPCAT1-206ENST00000514484 FAM220BPB1ANY3 271 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 SHISA9B4DS77 424 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 ZNF587BE7ETH6 402 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 ATP8B1O43520 1251 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 CHP2O43745 196 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 FMO6PO60774 539 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 LYPD3O95274 346 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 NPPAP01160 153 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 SOD3P08294 240 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 NQO1P15559 274 aaKnown RBP16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 PTH2RP49190 550 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 SEC24CP53992 1094 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 CDH11P55287 796 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 C1DQ13901 141 aaKnown RBP16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 LRRC23Q53EV4 343 aaPredicted RBP16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 SWT1Q5T5J6 900 aaKnown RBP16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 H1FNTQ75WM6 255 aaPredicted RBP16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 C1orf162Q8NEQ5 155 aaPredicted RBP16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 EPYCQ99645 322 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 ELAC2Q9BQ52 826 aaKnown RBP16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 TMEM43Q9BTV4 400 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 SLC7A7Q9UM01 511 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 B3GALT5Q9Y2C3 310 aa16.58■□□□□ 0.24
LPCAT1-206ENST00000514484 KPNA4O00629 521 aaPredicted RBP16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 SLC22A2O15244 555 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 TRAF3IP2O43734 574 aaPredicted RBP16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 COX4I1P13073 169 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 HLA-DOBP13765 273 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 TGFBR3Q03167 851 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 SHEQ5VZ18 495 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 TMEM108Q6UXF1 575 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 SPATA21Q7Z572 469 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 CARM1Q86X55 608 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 TREML1Q86YW5 311 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 LRRC75A-AS1Q8N1F1 130 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 PROX1Q92786 737 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 ASPNQ9BXN1 380 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 DLL4Q9NR61 685 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 CMTM6Q9NX76 183 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 SH3GLB1Q9Y371 365 aa16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 MAGED1Q9Y5V3 778 aaPredicted RBP16.57■□□□□ 0.24
LPCAT1-206ENST00000514484 TRAPPC13A5PLN9 417 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 MS4A18H0YCH9 400 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 ARHGEF9O43307 516 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 SERPINI2O75830 405 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 ZNF432O94892 652 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 CD40P25942 277 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 ROR2Q01974 943 aaKnown RBP16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 POU3F1Q03052 451 aaPredicted RBP16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 PMS2P3Q13401 168 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 PGGHGQ32M88 737 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 MS4A18Q3C1V0 323 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 CARD17Q5XLA6 110 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 ERICH5Q6P6B1 374 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 KLHL17Q6TDP4 642 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 KLHL24Q6TFL4 600 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 LINC00114Q6XXX2 140 aa16.56■□□□□ 0.24
LPCAT1-206ENST00000514484 DEF8Q6ZN54 512 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms