RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 REV1Q9UBZ9 1251 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 ZNF629Q9UEG4 869 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-213ENST00000514442 GYPBP06028 91 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 ALG10Q5BKT4 473 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 TMEM88Q6PEY1 159 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 SERPINA12Q8IW75 414 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 STEAP2Q8NFT2 490 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 OR14L1PQ8NHC6 308 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 ATG5Q9H1Y0 275 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 GSKIPQ9P0R6 139 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 MEIKINA0A087WXM9 373 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 RAD1O60671 282 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 ARAFP10398 606 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 HCCSP53701 268 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 AKR1C8PQ5T2L2 129 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 ASTLQ6HA08 431 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-213ENST00000514442 ZNF584Q8IVC4 421 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 TDHQ8IZJ6 230 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 OR2T4Q8NH00 348 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 OR4Q3Q8NH05 313 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 SFXN5Q8TD22 340 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 PBDC1Q9BVG4 233 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 ISYNA1Q9NPH2 558 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 B4GALT7Q9UBV7 327 aa12.17□□□□□ -0.46
TCOF1-213ENST00000514442 POM121BA6NF01 834 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 GGT3PA6NGU5 568 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 LGI1O95970 557 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 AMY2AP04746 511 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 CTSLP07711 333 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 CRYBB2P43320 205 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 LUMP51884 338 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-213ENST00000514442 CSNK1G2P78368 415 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 EEF1A2Q05639 463 aaKnown RBP12.16□□□□□ -0.46
TCOF1-213ENST00000514442 TP53I3Q53FA7 332 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 OR51Q1Q8NH59 317 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 SLC38A5Q8WUX1 472 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 SYNPO2LQ9H987 977 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 ZFP57Q9NU63 452 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 CBLCQ9ULV8 474 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 SSTP61278 116 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 SMAD2Q15796 467 aaKnown RBP12.16□□□□□ -0.46
TCOF1-213ENST00000514442 ATOH1Q92858 354 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-213ENST00000514442 HRH4Q9H3N8 390 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 ACSS1Q9NUB1 689 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-213ENST00000514442 DHCR7Q9UBM7 475 aaKnown RBP12.16□□□□□ -0.46
TCOF1-213ENST00000514442 SLC5A10A0PJK1 596 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 FAM183AA6NL82 134 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 IMPA2O14732 288 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 TO15178 435 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 FRMD1Q8N878 549 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 TM4SF18Q96CE8 201 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 PHB2Q99623 299 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 MAP3K3Q99759 626 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 EPHX3Q9H6B9 360 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 TMEM14AQ9Y6G1 99 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 A0A1B0GTL3 188 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 AGPAT2O15120 278 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 CBX7O95931 251 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 IFNA21P01568 189 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 FOLR3P41439 243 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 GLT8D1Q68CQ7 371 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 CALHM3Q86XJ0 350 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 ARL14Q8N4G2 192 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 PATE1Q8WXA2 126 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 THRSPQ92748 146 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 DDIT4LQ96D03 193 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 BPIFA2Q96DR5 249 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 CLCC1Q96S66 551 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 INPP5EQ9NRR6 644 aa12.16□□□□□ -0.46
TCOF1-213ENST00000514442 TSPAN15O95858 294 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 RIDAP52758 137 aaKnown RBP12.15□□□□□ -0.46
TCOF1-213ENST00000514442 MCCD1P59942 119 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-213ENST00000514442 FABP5Q01469 135 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 TLE3Q04726 772 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 NAA40Q86UY6 237 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 LIX1LQ8IVB5 337 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 FGF14Q92915 247 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 PGAM5Q96HS1 289 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 SIRT5Q9NXA8 310 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 MYEF2Q9P2K5 600 aaKnown RBP12.15□□□□□ -0.46
TCOF1-213ENST00000514442 MYO10Q9HD67 2058 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 GLAP06280 429 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 PAPD4Q6PIY7 484 aaKnown RBP12.15□□□□□ -0.46
TCOF1-213ENST00000514442 ZNF565Q8N9K5 539 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 OR4C15Q8NGM1 316 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 FOXN4Q96NZ1 517 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 OR5B2Q96R09 309 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 DLL4Q9NR61 685 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 ACER3Q9NUN7 267 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 TBC1D29Q9UFV1 150 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 SRPK3Q9UPE1 567 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 SLC6A5Q9Y345 797 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 BRINP1O60477 761 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 ELAVL4P26378 380 aaKnown RBP12.15□□□□□ -0.46
TCOF1-213ENST00000514442 DLX2Q07687 328 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-213ENST00000514442 PRAMEF8Q5VWM4 474 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 PRAMEF7Q5VXH5 474 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 KIAA1211LQ6NV74 962 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 OR13C3Q8NGS6 347 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 PTP4A1Q93096 173 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms