RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TMEM176BQ3YBM2 270 aaPredicted RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 TMEM201Q5SNT2 666 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 EEF1A1P5Q5VTE0 462 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 SP5Q6BEB4 398 aaPredicted RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 C1orf94Q6P1W5 598 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 PGBD2Q6P3X8 592 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 ESPNLQ6ZVH7 1005 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 KCTD8Q6ZWB6 473 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 ZNF550Q7Z398 422 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 VRK2Q86Y07 508 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 GRAMD2AQ8IUY3 354 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 UBQLNLQ8IYU4 475 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 DEPDC4Q8N2C3 294 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 CLIP4Q8N3C7 705 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 AQP11Q8NBQ7 271 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 OR9Q2Q8NGE9 314 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 OR52J3Q8NH60 311 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 MBD3L2Q8NHZ7 208 aaPredicted RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 ZNF563Q8TA94 476 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 TRUB1Q8WWH5 349 aaKnown RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 IPCEF1Q8WWN9 437 aaPredicted RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 OSTF1Q92882 214 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 MUL1Q969V5 352 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 TMIGD2Q96BF3 282 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 ZNF524Q96C55 264 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 NPAS1Q99742 590 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 TM9SF2Q99805 663 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 KCNJ16Q9NPI9 418 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 SERINC1Q9NRX5 453 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 DNAJB12Q9NXW2 375 aaKnown RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 ZNF629Q9UEG4 869 aaPredicted RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 PLEKHB1Q9UF11 243 aaPredicted RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 Q9UFV3 132 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 TMCC3Q9ULS5 477 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 ZNF443Q9Y2A4 671 aaPredicted RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 TPRKBQ9Y3C4 175 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 EXPH5Q8NEV8 1989 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 A0A0J9YW62 118 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 A1L4Q6 167 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 SH3D21A4FU49 640 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 CDHR4A6H8M9 788 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 KDM4EB2RXH2 506 aaPredicted RBP7.46□□□□□ -1.22
CCL28-204ENST00000514421 H0YC42 278 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 H3BSA7 217 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 M0R3H8 397 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 EIF1AYO14602 144 aaKnown RBP7.46□□□□□ -1.22
CCL28-204ENST00000514421 DVL2O14641 736 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 SEC14L5O43304 696 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 KLF4O43474 513 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 BCAS1O75363 584 aaPredicted RBP7.46□□□□□ -1.22
CCL28-204ENST00000514421 OR5F1O95221 314 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 CLDN1O95832 211 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 IL18BPO95998 194 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 IL11P20809 199 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 CTSSP25774 331 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 GSTT1P30711 240 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 OPRM1P35372 400 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 SLC1A3P43003 542 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 HTR3AP46098 478 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 GSSP48637 474 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 CRISP1P54107 249 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 TMBIM6P55061 237 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 TPD52P55327 224 aaPredicted RBP7.46□□□□□ -1.22
CCL28-204ENST00000514421 CARD18P57730 90 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 COPZ1P61923 177 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 SNRPGP62308 76 aaKnown RBP7.46□□□□□ -1.22
CCL28-204ENST00000514421 EFNB1P98172 346 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 IL5RAQ01344 420 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 MVKQ03426 396 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 FOXF1Q12946 379 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 PMS2P3Q13401 168 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 LSAMPQ13449 338 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 PIN1Q13526 163 aaPredicted RBP7.46□□□□□ -1.22
CCL28-204ENST00000514421 RAB39AQ14964 217 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 TRAM2Q15035 370 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 PTGES3Q15185 160 aaKnown RBP7.46□□□□□ -1.22
CCL28-204ENST00000514421 MRPL2Q5T653 305 aaKnown RBP7.46□□□□□ -1.22
CCL28-204ENST00000514421 SLX4IPQ5VYV7 408 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 C12orf73Q69YU5 71 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 OR2A2Q6IF42 318 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 PODNL1Q6PEZ8 512 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 ZNF836Q6ZNA1 936 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 PLEKHM3Q6ZWE6 761 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 PRSS48Q7RTY5 328 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 GRINAQ7Z429 371 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 P4HA3Q7Z4N8 544 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 GPR141Q7Z602 305 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 ADGRG3Q86Y34 549 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 C9orf106Q8NAJ2 232 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 OR2V1Q8NHB1 315 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 CNIH3Q8TBE1 160 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 ZFAND2BQ8WV99 257 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 SMPDL3BQ92485 455 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 ADGRG7Q96K78 797 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 KLHL15Q96M94 604 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 ZFP3Q96NJ6 502 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 TSC22D3Q99576 134 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 BCL7BQ9BQE9 202 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 FNDC11Q9BVV2 318 aa7.46□□□□□ -1.22
CCL28-204ENST00000514421 PRRG4Q9BZD6 226 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms