RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 ABOP16442 354 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 KIR2DS4P43632 304 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 ZNF45Q02386 682 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 TLE4Q04727 773 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 ZNF763Q0D2J5 394 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 SLC25A30Q5SVS4 291 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 MARCH8Q5T0T0 291 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 C1orf146Q5VVC0 180 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 SLC8B1Q6J4K2 584 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 C1orf94Q6P1W5 598 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 SASS6Q6UVJ0 657 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 ZNF571Q7Z3V5 609 aaPredicted RBP5.38□□□□□ -1.55
NUP54-215ENST00000514313 ZNF546Q86UE3 836 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 B3GNT7Q8NFL0 401 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 OR8B4Q96RC9 309 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 HIST1H4GQ99525 98 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 EBF4Q9BQW3 602 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 LY9Q9HBG7 655 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 SLC7A10Q9NS82 523 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 MARCH5Q9NX47 278 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 CD274Q9NZQ7 290 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 RBMY1BA6NDE4 496 aaKnown RBP5.37□□□□□ -1.55
NUP54-215ENST00000514313 RBMY1EA6NEQ0 496 aaKnown RBP5.37□□□□□ -1.55
NUP54-215ENST00000514313 LRRIQ4A6NIV6 560 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 TMEM110-MUSTN1A8MSY1 372 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 WRBO00258 174 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 PHOX2AO14813 284 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 ZNF780AO75290 641 aaPredicted RBP5.37□□□□□ -1.55
NUP54-215ENST00000514313 CTAG2O75638 210 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 TIMP1P01033 207 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 RBMY1DP0C7P1 496 aaKnown RBP5.37□□□□□ -1.55
NUP54-215ENST00000514313 RBMY1A1P0DJD3 496 aaKnown RBP5.37□□□□□ -1.55
NUP54-215ENST00000514313 PSMB1P20618 241 aaKnown RBP5.37□□□□□ -1.55
NUP54-215ENST00000514313 IFNA8P32881 189 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 CSNK1G2P78368 415 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 VPS26BQ4G0F5 336 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 C1orf100Q5SVJ3 147 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 BIVMQ86UB2 503 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 OFCC1Q8IZS5 231 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 GPD1LQ8N335 351 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 FNDC5Q8NAU1 212 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 OR7G2Q8NG99 324 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 FAM81AQ8TBF8 368 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 STARD8Q92502 1023 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 SLC38A4Q969I6 547 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 BTNL2Q9UIR0 455 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 PITPNC1Q9UKF7 332 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 NUP50Q9UKX7 468 aa5.37□□□□□ -1.55
NUP54-215ENST00000514313 SMCO3A2RU48 225 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 DLGAP1O14490 977 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 TNFSF11O14788 317 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 RIPPLY3P57055 190 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 TGFBR3Q03167 851 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 ARHGAP19Q14CB8 494 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 LCE1FQ5T754 118 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 Q6ZSR3 168 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 BZW1Q7L1Q6 419 aaKnown RBP5.36□□□□□ -1.55
NUP54-215ENST00000514313 ZNF100Q8IYN0 542 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 CEND1Q8N111 149 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 CCDC71LQ8N9Z2 235 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 BBOF1Q8ND07 529 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 BBS1Q8NFJ9 593 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 OR10G3Q8NGC4 313 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 OR51S1Q8NGJ8 323 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 ANKRD49Q8WVL7 239 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 KIFAP3Q92845 792 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 FAM122AQ96E09 287 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 TSNARE1Q96NA8 513 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 TSG101Q99816 390 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 ARHGDIGQ99819 225 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 P2RY13Q9BPV8 354 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 C11orf70Q9BRQ4 267 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 MTG1Q9BT17 334 aaPredicted RBP5.36□□□□□ -1.55
NUP54-215ENST00000514313 TMEM59Q9BXS4 323 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 ZDHHC11Q9H8X9 412 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 RPS10P5Q9NQ39 176 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 GCNT4Q9P109 453 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 VANGL2Q9ULK5 521 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 N6AMT1Q9Y5N5 214 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 TTC41PQ6P2S7 1318 aa5.36□□□□□ -1.55
NUP54-215ENST00000514313 PHF3Q92576 2039 aaKnown RBP5.35□□□□□ -1.55
NUP54-215ENST00000514313 CDHR2Q9BYE9 1310 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 KIR2DL5BA0A0G2JN68 375 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 KIR2DL5BA0A0G2JPC4 375 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 ZFP92A6NM28 416 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 SNAPINO95295 136 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 FGF1P05230 155 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 TBPP20226 339 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 ATP5C1P36542 298 aaKnown RBP5.35□□□□□ -1.55
NUP54-215ENST00000514313 HSD17B2P37059 387 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 MRPL23Q16540 153 aaKnown RBP5.35□□□□□ -1.55
NUP54-215ENST00000514313 KYAT1Q16773 422 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 TRIM40Q6P9F5 258 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 CLEC2AQ6UVW9 174 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 TMEM179BQ7Z7N9 219 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 PLA2G4DQ86XP0 818 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 KIR2DL5AQ8N109 375 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 MS4A15Q8N5U1 240 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 OR2AP1Q8NGE2 309 aa5.35□□□□□ -1.55
NUP54-215ENST00000514313 KIR2DL5BQ8NHK3 375 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms