RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 MED18Q9BUE0 208 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 TAS2R5Q9NYW4 299 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 ZMIZ1Q9ULJ6 1067 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 PCDHGB7Q9Y5F8 929 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 WIF1Q9Y5W5 379 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 PEX16Q9Y5Y5 336 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 GLCEO94923 617 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 IGHEP01854 428 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 HLA-DPB1P04440 258 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 APOBEC1P41238 236 aaKnown RBP13.53□□□□□ -0.24
VCAN-211ENST00000513984 TAS2R43P59537 309 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 INSM1Q01101 510 aaPredicted RBP13.53□□□□□ -0.24
VCAN-211ENST00000513984 KRR1Q13601 381 aaKnown RBP13.53□□□□□ -0.24
VCAN-211ENST00000513984 SF3A2Q15428 464 aaKnown RBP13.53□□□□□ -0.24
VCAN-211ENST00000513984 TBC1D25Q3MII6 688 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 MESTQ5EB52 335 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 LINC01590Q5TEZ4 76 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 TUBA3EQ6PEY2 450 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 OR51L1Q8NGJ5 315 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 BARHL1Q9BZE3 327 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 NUAK2Q9H093 628 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 SDHAF3Q9NRP4 125 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 MED11Q9P086 117 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 PPP4R1LQ9P1A2 415 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 GRHPRQ9UBQ7 328 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 GSTK1Q9Y2Q3 226 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 HRH3Q9Y5N1 445 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 TAF4O00268 1085 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 RNF13O43567 381 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 OR2T1O43869 369 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 DXOO77932 396 aaKnown RBP13.52□□□□□ -0.25
VCAN-211ENST00000513984 AHSA1O95433 338 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 ZNF806P0C7X5 589 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 CD53P19397 219 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 S100A5P33763 92 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 RORCP51449 518 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 E2F1Q01094 437 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 SLC25A53Q5H9E4 307 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 RAB11FIP2Q7L804 512 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 VASH1Q7L8A9 365 aaPredicted RBP13.52□□□□□ -0.25
VCAN-211ENST00000513984 SSX6Q7RTT6 188 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 SLC35F2Q8IXU6 374 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 OR11G2Q8NGC1 345 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 SLC25A46Q96AG3 418 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 LIN37Q96GY3 246 aaPredicted RBP13.52□□□□□ -0.25
VCAN-211ENST00000513984 C4orf36Q96KX1 117 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 TAAR9Q96RI9 348 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 DDA1Q9BW61 102 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 METTL7AQ9H8H3 244 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 RPRD1BQ9NQG5 326 aaKnown RBP13.52□□□□□ -0.25
VCAN-211ENST00000513984 CRNNQ9UBG3 495 aaPredicted RBP13.52□□□□□ -0.25
VCAN-211ENST00000513984 MOKQ9UQ07 419 aa13.52□□□□□ -0.25
VCAN-211ENST00000513984 SIRT4Q9Y6E7 314 aaPredicted RBP13.52□□□□□ -0.25
VCAN-211ENST00000513984 C4orf47A7E2U8 309 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 FTCDNL1E5RQL4 147 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 GABRPO00591 440 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 ZNF208O43345 1280 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 GALR2O43603 387 aaPredicted RBP13.51□□□□□ -0.25
VCAN-211ENST00000513984 ITGA10O75578 1167 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 SERPINI2O75830 405 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 CDRT1O95170 752 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 DLGAP3O95886 979 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 CELA2AP08217 269 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 CD40LGP29965 261 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 ETV6P41212 452 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 ACTA2P62736 377 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 ACTG2P63267 376 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 CDCP2Q5VXM1 449 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 TMEM81Q6P7N7 255 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 ARSKQ6UWY0 536 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 GHDCQ8N2G8 530 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 SYS1Q8N2H4 156 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 RFLNBQ8N5W9 214 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 SMAP2Q8WU79 429 aaPredicted RBP13.51□□□□□ -0.25
VCAN-211ENST00000513984 SLC25A36Q96CQ1 311 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 NPAS1Q99742 590 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 ALG12Q9BV10 488 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 TMED9Q9BVK6 235 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 OR11A1Q9GZK7 315 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 CPNE5Q9HCH3 593 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 SNTG1Q9NSN8 517 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 PADI1Q9ULC6 663 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 POLHQ9Y253 713 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 CHCHD2Q9Y6H1 151 aaPredicted RBP13.51□□□□□ -0.25
VCAN-211ENST00000513984 ALPK2Q86TB3 2170 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 TTC28Q96AY4 2481 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 ZNF318Q5VUA4 2279 aa13.51□□□□□ -0.25
VCAN-211ENST00000513984 IQCMA0A1B0GVH7 501 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 PLPP2O43688 288 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 ZNF12P17014 697 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 GRPRP30550 384 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 NAA10P41227 235 aaPredicted RBP13.5□□□□□ -0.25
VCAN-211ENST00000513984 CASP3P42574 277 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 MAP2K6P52564 334 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 PPP5CP53041 499 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 OR12D2P58182 307 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 FOXF1Q12946 379 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 CDONQ4KMG0 1287 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 C6orf15Q6UXA7 325 aaPredicted RBP13.5□□□□□ -0.25
VCAN-211ENST00000513984 NDUFAF7Q7L592 441 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms