RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 GNGT1P63211 74 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 CYBRD1Q53TN4 286 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 NCMAPQ5T1S8 102 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 TMEM225Q6GV28 225 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 LINGO2Q7L985 606 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 TSEN54Q7Z6J9 526 aaKnown RBP8.54□□□□□ -1.04
RNF4-221ENST00000513643 CPLX4Q7Z7G2 160 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 CARM1Q86X55 608 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 P3H2Q8IVL5 708 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 WDR31Q8NA23 367 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 POMGNT2Q8NAT1 580 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 C1orf162Q8NEQ5 155 aaPredicted RBP8.54□□□□□ -1.04
RNF4-221ENST00000513643 ZNF417Q8TAU3 575 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 LIPHQ8WWY8 451 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 MOGAT1Q96PD6 335 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 ZNF587Q96SQ5 575 aaPredicted RBP8.54□□□□□ -1.04
RNF4-221ENST00000513643 MEPEQ9NQ76 525 aaPredicted RBP8.54□□□□□ -1.04
RNF4-221ENST00000513643 CCM2LQ9NUG4 571 aaPredicted RBP8.54□□□□□ -1.04
RNF4-221ENST00000513643 ASB6Q9NWX5 421 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 MRPL39Q9NYK5 338 aaKnown RBP8.54□□□□□ -1.04
RNF4-221ENST00000513643 TAS2R16Q9NYV7 291 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 SLC13A4Q9UKG4 626 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 RCE1Q9Y256 329 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 ARL2BPQ9Y2Y0 163 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 SLC25A15Q9Y619 301 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 FLNAP21333 2647 aaKnown RBP8.54□□□□□ -1.04
RNF4-221ENST00000513643 RAI1Q7Z5J4 1906 aaPredicted RBP8.54□□□□□ -1.04
RNF4-221ENST00000513643 SETD2Q9BYW2 2564 aaPredicted RBP8.54□□□□□ -1.04
RNF4-221ENST00000513643 ZANQ9Y493 2812 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 USF3Q68DE3 2245 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 OR6C65A6NJZ3 312 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 CPSF4LA6NMK7 179 aaKnown RBP8.53□□□□□ -1.04
RNF4-221ENST00000513643 PLPP3O14495 311 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 NDUFAB1O14561 156 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 FFAR1O14842 300 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 SHOX2O60902 331 aaPredicted RBP8.53□□□□□ -1.04
RNF4-221ENST00000513643 PRSS23O95084 383 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 OR5F1O95221 314 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 IGHV3-9P01782 118 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 RAF1P04049 648 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 ASAH2BP0C7U1 165 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 HLA-DOBP13765 273 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 PAX1P15863 534 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 GGT1P19440 569 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 TNFRSF1BP20333 461 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 FUT4P22083 530 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 IL32P24001 234 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 MPGP29372 298 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 SELENOPP49908 381 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 PSME3P61289 254 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 ZP4Q12836 540 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 FAPQ12884 760 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 ACKR1Q16570 336 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 ZNF74Q16587 644 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 IQCCQ4KMZ1 466 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 OR7E24Q6IFN5 339 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 CBLL1Q75N03 491 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 AAED1Q7RTV5 226 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 SLC46A3Q7Z3Q1 461 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 PXKQ7Z7A4 578 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 KRTAP1-3Q8IUG1 177 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 WDFY1Q8IWB7 410 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 TMEM123Q8N131 208 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 KDM8Q8N371 416 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 C17orf78Q8N4C9 275 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 PROX1Q92786 737 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 SLC25A36Q96CQ1 311 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 PIK3IP1Q96FE7 263 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 PLPPR2Q96GM1 343 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 ZC3HAV1LQ96H79 300 aaKnown RBP8.53□□□□□ -1.04
RNF4-221ENST00000513643 ALPK1Q96QP1 1244 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 CCT8L2Q96SF2 557 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 EPYCQ99645 322 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 PIP5K1AQ99755 562 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 NSRP1Q9H0G5 558 aaKnown RBP8.53□□□□□ -1.04
RNF4-221ENST00000513643 SLCO5A1Q9H2Y9 848 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 ALG2Q9H553 416 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 TAS2R5Q9NYW4 299 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 NPAP1Q9NZP6 1156 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 CD300AQ9UGN4 299 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 SLC7A7Q9UM01 511 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 A4GNTQ9UNA3 340 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 PLEKHA6Q9Y2H5 1048 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 SH3GLB1Q9Y371 365 aa8.53□□□□□ -1.04
RNF4-221ENST00000513643 LRRN3E7EW58 273 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 CXCR6O00574 342 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 UPK3AO75631 287 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 PLAUP00749 431 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 ZNF43P17038 809 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 RBM34P42696 430 aaKnown RBP8.52□□□□□ -1.05
RNF4-221ENST00000513643 OR1E2P47887 323 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 NUDT2P50583 147 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 NCALDP61601 193 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 PIN1Q13526 163 aaPredicted RBP8.52□□□□□ -1.05
RNF4-221ENST00000513643 KRT72Q14CN4 511 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 DEFB113Q30KQ7 82 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 CASP12Q6UXS9 341 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 ZNF704Q6ZNC4 412 aaPredicted RBP8.52□□□□□ -1.05
RNF4-221ENST00000513643 ZNF627Q7L945 461 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 GPAT4Q86UL3 456 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms