RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 NRMQ8IXM6 262 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 GPALPP1Q8IXQ4 340 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 ENTHD1Q8IYW4 607 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF786Q8N393 782 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 OR6S1Q8NH40 331 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 OR5W2Q8NH69 310 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 FAM222BQ8WU58 562 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 TMEM255BQ8WV15 326 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 GTPBP3Q969Y2 492 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 C3orf49Q96BT1 292 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 SPACA9Q96E40 222 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 TUBA1CQ9BQE3 449 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 DEFB126Q9BYW3 111 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 LIN28AQ9H9Z2 209 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 FKBP14Q9NWM8 211 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 CNOT2Q9NZN8 540 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 YARS2Q9Y2Z4 477 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 TPRKBQ9Y3C4 175 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 CDH10Q9Y6N8 788 aa9.43□□□□□ -0.9
PDLIM5-217ENST00000512274 ANKRD33BA6NCL7 494 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 NDUFB5O43674 189 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 SMPD2O60906 423 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 RCBTB2O95199 551 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 F12P00748 615 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 TSPAN19P0C672 248 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 LINGO3P0C6S8 592 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 PIPP12273 146 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 PGCP20142 388 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 ACVR2AP27037 513 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 HTR3AP46098 478 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 P2RX1P51575 399 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 TPD52P55327 224 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 GPR85P60893 370 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 HOXC5Q00444 222 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 MVKQ03426 396 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 C17orf67Q0P5P2 114 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 DAZAP2Q15038 168 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 OCLNQ16625 522 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF791Q3KP31 576 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC25A35Q3KQZ1 300 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC25A53Q5H9E4 307 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 MEDAGQ5VYS4 303 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 RNLSQ5VYX0 342 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC27A4Q6P1M0 643 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 ARHGAP11AQ6P4F7 1023 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 OPN5Q6U736 354 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF227Q86WZ6 799 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 CDK20Q8IZL9 346 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 PHOSPHO1Q8TCT1 267 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 APH1BQ8WW43 257 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 ST8SIA1Q92185 356 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 Q96MT0 163 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 GPA33Q99795 319 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 TEX12Q9BXU0 123 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 TBL1XR1Q9BZK7 514 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 SH2D2AQ9NP31 389 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 SDHAF3Q9NRP4 125 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 SCN3BQ9NY72 215 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 SELENONQ9NZV5 590 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 BAIAP2Q9UQB8 552 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 ARHGAP21Q5T5U3 1957 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 VPS13CQ709C8 3753 aa9.42□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF407Q9C0G0 2248 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 HIVEP2P31629 2446 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 GTPBP1O00178 669 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 TP53I11O14683 189 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 PTP4A3O75365 173 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 IFNA2P01563 188 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 HMGN1P05114 100 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 APEHP13798 732 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 FKBP2P26885 142 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC15A1P46059 708 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 RFX3P48380 749 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 CYB561P49447 251 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 MLF1P58340 268 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 RPS4XP62701 263 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 IL5RAQ01344 420 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF117Q03924 483 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 CBFBQ13951 182 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 RTL6Q6ICC9 239 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 B3GNT6Q6ZMB0 384 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 PRSS48Q7RTY5 328 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 KIF18BQ86Y91 864 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF614Q8N883 585 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 LINC01560Q8TB33 94 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 FAM81AQ8TBF8 368 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 TEX47Q8TBZ9 253 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 BPIFA2Q96DR5 249 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 SGCZQ96LD1 299 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 RASL10BQ96S79 203 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 GPX7Q96SL4 187 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 PRR14Q9BWN1 585 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 FN3KQ9H479 309 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 MEPEQ9NQ76 525 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 MRPS18AQ9NVS2 196 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 IMPAD1Q9NX62 359 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 ALKBH4Q9NXW9 302 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF226Q9NYT6 803 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 RPS6KB2Q9UBS0 482 aa9.41□□□□□ -0.9
PDLIM5-217ENST00000512274 SIGLEC7Q9Y286 467 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms