RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	UBR5	O95071	2799 aa	Predicted RBP	12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	FREM1	Q5H8C1	2179 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107		A0A1W2PNV4	684 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	EFCAB9	A8MZ26	197 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	C11orf98	E9PRG8	122 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107		J3QKU1	62 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	PDLIM1	O00151	329 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	TRAF3IP2	O43734	574 aa	Predicted RBP	12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	OR2T1	O43869	369 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	OR10H3	O60404	316 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	FAS	P25445	335 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	DNAJA1	P31689	397 aa	Known RBP	12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	PTGER4	P35408	488 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	DAP	P51397	102 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	SMIM11A	P58511	58 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	RPS4X	P62701	263 aa	Known RBP	12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	SIRPA	P78324	504 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	RPL18	Q07020	188 aa	Known RBP	12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	RASGEF1B	Q0VAM2	473 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	DBP	Q10586	325 aa	Predicted RBP	12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	PMS2P3	Q13401	168 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	RIPPLY2	Q5TAB7	128 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	C5orf46	Q6UWT4	87 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	CHMP1B	Q7LBR1	199 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	P4HA3	Q7Z4N8	544 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	BTLA	Q7Z6A9	289 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	AQP11	Q8NBQ7	271 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	RELL2	Q8NC24	303 aa	Predicted RBP	12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	OR8D4	Q8NGM9	314 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	PIGX	Q8TBF5	258 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	GTPBP3	Q969Y2	492 aa	Known RBP	12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	FEV	Q99581	238 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	PLA2G12A	Q9BZM1	189 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	SMURF2	Q9HAU4	748 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	NANS	Q9NR45	359 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	IL20RA	Q9UHF4	553 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	MCTS1	Q9ULC4	181 aa	Known RBP	12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	SIGLEC7	Q9Y286	467 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	FLVCR1	Q9Y5Y0	555 aa		12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	INTS1	Q8N201	2190 aa	Known RBP	12.93	□□□□□ -0.34
MATR3-238	ENST00000512107	IGKV3D-15	A0A087WSY6	115 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	MCIDAS	D6RGH6	385 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	DNPH1	O43598	174 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	ZG16	O60844	167 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	MITF	O75030	526 aa	Predicted RBP	12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	SS18L1	O75177	396 aa	Predicted RBP	12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	DEAF1	O75398	565 aa	Predicted RBP	12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	PLG	P00747	810 aa	Predicted RBP	12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	MT-ATP6	P00846	226 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	CGA	P01215	116 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	F13B	P05160	661 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	HOXD4	P09016	255 aa	Predicted RBP	12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	AGTR1	P30556	359 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	IFNA8	P32881	189 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	SLC16A1	P53985	500 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	RUNX1T1	Q06455	604 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	SHQ1	Q6PI26	577 aa	Known RBP	12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	KLHL17	Q6TDP4	642 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	CREB3L2	Q70SY1	520 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	MAMDC2	Q7Z304	686 aa	Predicted RBP	12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	RP1L1	Q8IWN7	2480 aa	Predicted RBP	12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	OR9K2	Q8NGE7	335 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	OR5K1	Q8NHB7	308 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	GNPDA2	Q8TDQ7	276 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	GIPC3	Q8TF64	312 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	STARD4	Q96DR4	205 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	NAA11	Q9BSU3	229 aa	Predicted RBP	12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	PRRG4	Q9BZD6	226 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	UCK2	Q9BZX2	261 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	EGLN3	Q9H6Z9	239 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	BCO1	Q9HAY6	547 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	TIGAR	Q9NQ88	270 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	PAQR5	Q9NXK6	330 aa	Predicted RBP	12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	REV1	Q9UBZ9	1251 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	TMCC3	Q9ULS5	477 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	OAZ3	Q9UMX2	235 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	HIF3A	Q9Y2N7	669 aa		12.92	□□□□□ -0.34
MATR3-238	ENST00000512107	PCNX1	Q96RV3	2341 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	ALPK2	Q86TB3	2170 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	CLEC18A	A5D8T8	446 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	UNC119B	A6NIH7	251 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	BLOC1S5-TXNDC5	H3BN57	136 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	GNGT2	O14610	69 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	IMPA2	O14732	288 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	ADORA3	P0DMS8	318 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	FOXG1	P55316	489 aa	Predicted RBP	12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	ZP4	Q12836	540 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	MELK	Q14680	651 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	RCN1	Q15293	331 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	PHYHD1	Q5SRE7	291 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	ZFP1	Q6P2D0	407 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	CLEC18B	Q6UXF7	455 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	LINGO2	Q7L985	606 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	GPAT4	Q86UL3	456 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	PQLC1	Q8N2U9	271 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	SCAI	Q8N9R8	606 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	CLEC18C	Q8NCF0	446 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	ICA1L	Q8NDH6	482 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	ADPRHL1	Q8NDY3	354 aa		12.91	□□□□□ -0.34

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