RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 GPR52Q9Y2T5 361 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 PLXNB2O15031 1838 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 OR6C76A6NM76 312 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SMLR1H3BR10 107 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SEMA4FO95754 770 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 RAC2P15153 192 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 NQO2P16083 231 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 NPPBP16860 134 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 LAP3P28838 519 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 GABARAPL2P60520 117 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 DMWDQ09019 674 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 TCTE1Q5JU00 501 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 TMEM240Q5SV17 173 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 BRICD5Q6PL45 260 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 CYHR1Q6ZMK1 362 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 PHOSPHO1Q8TCT1 267 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SORCS2Q96PQ0 1159 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 POLDIP3Q9BY77 421 aaKnown RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 NUP214P35658 2090 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 A0A1B0GTW7 788 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SLC2A1P11166 492 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 ZNF25P17030 456 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SLC5A2P31639 672 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 MRPL19P49406 292 aaKnown RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 HOXC5Q00444 222 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 FAM69AQ5T7M9 428 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 PLBD1Q6P4A8 553 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 NRARPQ7Z6K4 114 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 CMTM1Q8IZ96 169 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 OR8J2Q8NGG1 315 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 LYSMD1Q96S90 227 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 ALG12Q9BV10 488 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 CHRDQ9H2X0 955 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SEMA6CQ9H3T2 930 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 UBTD1Q9HAC8 227 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 APOBEC3BQ9UH17 382 aaKnown RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 LIPT1Q9Y234 373 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 KLK8O60259 260 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 KCNK5O95279 499 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 HLA-HP01893 362 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 FBXO45P0C2W1 286 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 ZNF888P0CJ79 500 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 PXNP49023 591 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 PDLIM3Q53GG5 364 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 ETV3LQ6ZN32 361 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 RTL10Q7L3V2 364 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 OR8J1Q8NGP2 316 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 OR5M3Q8NGP4 307 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 GNPDA2Q8TDQ7 276 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 GAB3Q8WWW8 586 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 FAM3CQ92520 227 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 TVP23CQ96ET8 276 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 OR2M2Q96R28 347 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 ARHGDIGQ99819 225 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 NUDT16L1Q9BRJ7 211 aaKnown RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 VAMP8Q9BV40 100 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 JRKO75564 520 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 HLA-AP01891 365 aaKnown RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 AKAIN1P0CW23 69 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 HNRNPA2B1P22626 353 aaKnown RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 CRHBPP24387 322 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 MPGP29372 298 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 HCCSP53701 268 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 HAGHQ16775 308 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 COX20Q5RI15 118 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 C6orf132Q5T0Z8 1188 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 ACBD7Q8N6N7 88 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 OR51Q1Q8NH59 317 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 GIMAP1Q8WWP7 306 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 INTS12Q96CB8 462 aaKnown RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 EID2BQ96D98 161 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 C1QTNF3Q9BXJ4 246 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 IKZF5Q9H5V7 419 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 STARD5Q9NSY2 213 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 CSF1P09603 554 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 THBS3P49746 956 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 IHHQ14623 411 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 PROX2Q3B8N5 592 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 TMEM88Q6PEY1 159 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 SHFQ7M4L6 423 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 LIX1LQ8IVB5 337 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 DNAJC22Q8N4W6 341 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 IL17RDQ8NFM7 739 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 OR5K2Q8NHB8 316 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 EP400Q96L91 3159 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 ST6GALNAC5Q9BVH7 336 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 SPACA1Q9HBV2 294 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 RNF13O43567 381 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 PVRP15151 417 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 TSFMP43897 325 aaKnown RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 LCN6P62502 163 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 CTBSQ01459 385 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 SYPL1Q16563 259 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 DUSP19Q8WTR2 217 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 EXTL1Q92935 676 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 POM121Q96HA1 1249 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 FAM46AQ96IP4 442 aaKnown RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 KATNB1Q9BVA0 655 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 GPN2Q9H9Y4 310 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms