RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TRBV2A0A0J9YWF9 115 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 RNF103-CHMP3A0A140T963 221 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 GABRR3A8MPY1 467 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 ARHGEF33A8MVX0 844 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 A8MXK9 166 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 BCKDKO14874 412 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 ZNF749O43361 778 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 PRPSAP2O60256 369 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 GAS8O95995 478 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 ASS1P00966 412 aaKnown RBP2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 IGHDP01880 384 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 SERPINA7P05543 415 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 RHOCP08134 193 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 NUDT17P0C025 328 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 FCGR2BP31994 310 aaPredicted RBP2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 FCGR2CP31995 323 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 FHITP49789 147 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 PPP1CAP62136 330 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 PAX8Q06710 450 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 LCP2Q13094 533 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 IFI44LQ53G44 452 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 CASC10Q5T4H9 136 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 KPRPQ5T749 579 aaPredicted RBP2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 CAPN13Q6MZZ7 669 aaPredicted RBP2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 PNCKQ6P2M8 343 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 SCARA5Q6ZMJ2 495 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 UNC93AQ86WB7 457 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 CARM1Q86X55 608 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 CNTN4Q8IWV2 1026 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 Q8N377 158 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 FBXW8Q8N3Y1 598 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 OR52K2Q8NGK3 314 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 OR6K2Q8NGY2 324 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 ST7LQ8TDW4 575 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 CHPT1Q8WUD6 406 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 LIPHQ8WWY8 451 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 PIK3IP1Q96FE7 263 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 BTN2A3PQ96KV6 586 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 C16orf45Q96MC5 204 aaPredicted RBP2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 RUNDC3BQ96NL0 473 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 SERPINB11Q96P15 392 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 RPRD1AQ96P16 312 aaPredicted RBP2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 TSGA13Q96PP4 275 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 TMEM237Q96Q45 408 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 ALKBH3Q96Q83 286 aaPredicted RBP2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 TBX15Q96SF7 602 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 PSMB7Q99436 277 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 NAP1L3Q99457 506 aaPredicted RBP2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 NTMT1Q9BV86 223 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 DUSP16Q9BY84 665 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 ULBP1Q9BZM6 244 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 TM6SF2Q9BZW4 377 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 C1orf21Q9H246 121 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 TUBB1Q9H4B7 451 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 WDR54Q9H977 334 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 ZNF226Q9NYT6 803 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 C6orf203Q9P0P8 240 aaPredicted RBP2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 XPO7Q9UIA9 1087 aaKnown RBP2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 FAM215AQ9Y5M1 114 aa2.82□□□□□ -1.96
TOPBP1-208ENST00000511439 ANKRD36A6QL64 1941 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 AGRNO00468 2067 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 IGLV4-3A0A075B6K6 122 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 NSG1A0A0A6YYJ2 146 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 KRT87PA6NCN2 255 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 YJEFN3A6XGL0 299 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 EEF1E1-BLOC1S5C9J1V9 151 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 E9PMD0 336 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 CDC7O00311 574 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 PSMD3O43242 534 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 EEF1E1O43324 174 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 TXNL1O43396 289 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 NOL3O60936 208 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 CLDN11O75508 207 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 DEXIO95424 95 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 LCA5LO95447 670 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 ADCY5O95622 1261 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 POP4O95707 220 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 GUCA1CO95843 209 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 CHRNGP07510 517 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 B4GALT1P15291 398 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 SLC25A16P16260 332 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 XRCC1P18887 633 aaPredicted RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 TPSB2P20231 275 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 GLRA1P23415 457 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 CAPGP40121 348 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 NSG1P42857 185 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 GTF2BQ00403 316 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 FKBP3Q00688 224 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 MS4A2Q01362 244 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 RAD51Q06609 339 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 RBBP4Q09028 425 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 RIGQ13278 110 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 GK2Q14410 553 aaPredicted RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 MESDQ14696 234 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 MEF2DQ14814 521 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 OR1C1Q15619 314 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 TPSAB1Q15661 275 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 STX1AQ16623 288 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 KNOP1Q1ED39 458 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 HFEQ30201 348 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms