RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 CIB1Q99828 191 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 HOPXQ9BPY8 73 aaPredicted RBP4.67□□□□□ -1.66
GYPB-212ENST00000511198 DCUN1D5Q9BTE7 237 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 MED18Q9BUE0 208 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 MROQ9BYG7 248 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 TTTY12Q9BZ98 90 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 DHX35Q9H5Z1 703 aaKnown RBP4.67□□□□□ -1.66
GYPB-212ENST00000511198 XKR8Q9H6D3 395 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 LIN28AQ9H9Z2 209 aaKnown RBP4.67□□□□□ -1.66
GYPB-212ENST00000511198 MEAF6Q9HAF1 191 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 HMG20AQ9NP66 347 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 INTS10Q9NVR2 710 aaKnown RBP4.67□□□□□ -1.66
GYPB-212ENST00000511198 SMOXQ9NWM0 555 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 SMPD3Q9NY59 655 aaPredicted RBP4.67□□□□□ -1.66
GYPB-212ENST00000511198 SPATA7Q9P0W8 599 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 ACTR3BQ9P1U1 418 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 ZDHHC2Q9UIJ5 367 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 CDC14AQ9UNH5 594 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 KLHL20Q9Y2M5 609 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 NDUFAF1Q9Y375 327 aa4.67□□□□□ -1.66
GYPB-212ENST00000511198 SNRNP200O75643 2136 aaKnown RBP4.67□□□□□ -1.66
GYPB-212ENST00000511198 SAA2-SAA4A0A096LPE2 208 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 ZCWPW2A0A1B0GU75 182 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 ATP6AP2A0A1C7CYW4 349 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 A0A1W2PPW3 197 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 A0A1W2PQ67 120 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 FEZF1A0PJY2 475 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 PRORSD1PA6NEY8 169 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 CBY3A6NI87 242 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 C2orf74A8MZ97 194 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 CLDN25C9JDP6 229 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 BMPR1BO00238 502 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 DLGAP1O14490 977 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 UBDO15205 165 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 PFDN6O15212 129 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 CLOCKO15516 846 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 MFSD11O43934 449 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 SOCS5O75159 536 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 TIPRLO75663 272 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 ATP6AP2O75787 350 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 CDK14O94921 469 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 HPRP00739 348 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 IGLV2-11P01706 119 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 UGT2B7P16662 529 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 ATP6V1B2P21281 511 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 SPINT3P49223 89 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 MRPL19P49406 292 aaKnown RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 EIF2B2P49770 351 aaKnown RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 BMXP51813 675 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 NAGLUP54802 743 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 CDH15P55291 814 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 RAB10P61026 200 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 AP1S1P61966 158 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 UBA52P62987 128 aaKnown RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 PLGLB1Q02325 96 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 PMS2P3Q13401 168 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 PRPSAP1Q14558 356 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 ANKDD1AQ495B1 522 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 PPP6R3Q5H9R7 873 aaPredicted RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 GPR107Q5VW38 600 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 NANOGP8Q6NSW7 305 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 IL20RBQ6UXL0 311 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 KCTD8Q6ZWB6 473 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 CPEB2Q7Z5Q1 589 aaKnown RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 LINC00523Q86TU6 105 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 AMZ2Q86W34 360 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 ZC3HC1Q86WB0 502 aaKnown RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 EPHX4Q8IUS5 362 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 SLC22A9Q8IVM8 553 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 TBC1D21Q8IYX1 336 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 PARP8Q8N3A8 854 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 CBR4Q8N4T8 237 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 RNF148Q8N7C7 305 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 RTL3Q8N8U3 475 aaKnown RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 PAPD5Q8NDF8 572 aaKnown RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 OR2M7Q8NG81 312 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 M1APQ8TC57 530 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 SMAP2Q8WU79 429 aaPredicted RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 RAB40AQ8WXH6 277 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 HTRA1Q92743 480 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 GLYATL1Q969I3 302 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 TAMM41Q96BW9 452 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 ZNF285Q96NJ3 590 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 SLC29A1Q99808 456 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 RBM4BQ9BQ04 359 aaKnown RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 MRPL57Q9BQC6 102 aaKnown RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 C1QTNF5Q9BXJ0 243 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 RSPO3Q9BXY4 272 aaPredicted RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 GBA3Q9H227 469 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 SEMA6AQ9H2E6 1030 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 RAD21L1Q9H4I0 556 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 RMND5AQ9H871 391 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 NOL11Q9H8H0 719 aaKnown RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 PARVBQ9HBI1 364 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 ANKHQ9HCJ1 492 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 MMP25Q9NPA2 562 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 SPHK1Q9NYA1 384 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 KLHL8Q9P2G9 620 aaPredicted RBP4.66□□□□□ -1.66
GYPB-212ENST00000511198 TRPC4Q9UBN4 977 aa4.66□□□□□ -1.66
GYPB-212ENST00000511198 MALT1Q9UDY8 824 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms