RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 RIN1Q13671 783 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 DPY19L1Q2PZI1 675 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 C3orf36Q3SXR2 165 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 C1QTNF12Q5T7M4 302 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 KLHL24Q6TFL4 600 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 MAVSQ7Z434 540 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 C10orf111Q8N326 155 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 NUP37Q8NFH4 326 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 SLC25A36Q96CQ1 311 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 WFDC6Q9BQY6 131 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 GPR35Q9HC97 309 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 HPRP00739 348 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 HLA-DOBP13765 273 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 DAOP14920 347 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 ITGA2P17301 1181 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 HOXB9P17482 250 aaPredicted RBP13.74□□□□□ -0.21
RAB40C-202ENST00000509637 RPS5P46782 204 aaKnown RBP13.74□□□□□ -0.21
RAB40C-202ENST00000509637 STX3Q13277 289 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 PRAMEF8Q5VWM4 474 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 PRAMEF7Q5VXH5 474 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 ATG16L1Q676U5 607 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 MDP1Q86V88 176 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 PEX5LQ8IYB4 626 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 ZNF440Q8IYI8 595 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 LRRC34Q8IZ02 419 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 TMEM123Q8N131 208 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.74□□□□□ -0.21
RAB40C-202ENST00000509637 FAM169BQ8N8A8 192 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 MFSD8Q8NHS3 518 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 TAAR8Q969N4 342 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 TMEM19Q96HH6 336 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 SNX18Q96RF0 628 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 B3GNT2Q9NY97 397 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 RASD1Q9Y272 281 aa13.74□□□□□ -0.21
RAB40C-202ENST00000509637 MS4A18H0YCH9 400 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 TRAF3IP2O43734 574 aaPredicted RBP13.73□□□□□ -0.21
RAB40C-202ENST00000509637 KRT33AO76009 404 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 VENTXO95231 258 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 HTR2AP28223 471 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 UBE2NP61088 152 aaKnown RBP13.73□□□□□ -0.21
RAB40C-202ENST00000509637 CEACAM16Q2WEN9 425 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 MS4A18Q3C1V0 323 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 RNF220Q5VTB9 566 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 SPATA21Q7Z572 469 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 ZNF786Q8N393 782 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 OR9I1Q8NGQ6 314 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 STK35Q8TDR2 534 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 MAL2Q969L2 176 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 MS4A3Q96HJ5 214 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 SPATA9Q9BWV2 254 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 TAPBPLQ9BX59 468 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 TPK1Q9H3S4 243 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 ZNF442Q9H7R0 627 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 TPT1P8Q9HAU6 139 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 ZNF224Q9NZL3 707 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 DYSFO75923 2080 aa13.73□□□□□ -0.21
RAB40C-202ENST00000509637 RFXANKO14593 260 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 TPST1O60507 370 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 VAMP5O95183 116 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 ADRA2AP08913 450 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 NPR2P20594 1047 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 CBLP22681 906 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 COL8A2P25067 703 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 SEC24CP53992 1094 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 CDH15P55291 814 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 DSTNP60981 165 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 ADRM1Q16186 407 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 KRT71Q3SY84 523 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 SLC9B1Q4ZJI4 515 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 LIN52Q52LA3 116 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 ELFN2Q5R3F8 820 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 LRP11Q86VZ4 500 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 OR4F15Q8NGB8 312 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 TXNDC15Q96J42 360 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 OXGR1Q96P68 337 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 OR2M2Q96R28 347 aa13.72□□□□□ -0.21
RAB40C-202ENST00000509637 MRPL37Q9BZE1 423 aaKnown RBP13.72□□□□□ -0.21
RAB40C-202ENST00000509637 SSU72Q9NP77 194 aaKnown RBP13.72□□□□□ -0.21
RAB40C-202ENST00000509637 MYOZ1Q9NP98 299 aaPredicted RBP13.72□□□□□ -0.21
RAB40C-202ENST00000509637 MYEF2Q9P2K5 600 aaKnown RBP13.72□□□□□ -0.21
RAB40C-202ENST00000509637 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.72□□□□□ -0.21
RAB40C-202ENST00000509637 TMEFF2Q9UIK5 374 aaPredicted RBP13.72□□□□□ -0.21
RAB40C-202ENST00000509637 V9GYY5 206 aaPredicted RBP13.72□□□□□ -0.21
RAB40C-202ENST00000509637 OR6C65A6NJZ3 312 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 M0R082 166 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 TPST2O60704 377 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 HLA-HP01893 362 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 ZCCHC18P0CG32 403 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 APEX1P27695 318 aaKnown RBP13.71□□□□□ -0.21
RAB40C-202ENST00000509637 CRATP43155 626 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 AQP5P55064 265 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 NPRL3Q12980 569 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 CCNIQ14094 377 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 KRT80Q6KB66 452 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 ABHD12BQ7Z5M8 362 aaPredicted RBP13.71□□□□□ -0.21
RAB40C-202ENST00000509637 MSRB3Q8IXL7 192 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 MREGQ8N565 214 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 TRIML2Q8N7C3 387 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 FGFBP3Q8TAT2 258 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms