RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 CMIPQ8IY22 773 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 ZDHHC22Q8N966 263 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 TWIST2Q8WVJ9 160 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 RDH5Q92781 318 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 MRPL24Q96A35 216 aaKnown RBP8.08□□□□□ -1.12
NEDD9-211ENST00000508546 ROPN1LQ96C74 230 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 ZG16BQ96DA0 208 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 FAHD2AQ96GK7 314 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 DUSP26Q9BV47 211 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 OR51I1Q9H343 314 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 LPAR2Q9HBW0 351 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 ESM1Q9NQ30 184 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 SLC52A3Q9NQ40 469 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 TREM2Q9NZC2 230 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 TBK1Q9UHD2 729 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 PRDM4Q9UKN5 801 aa8.08□□□□□ -1.12
NEDD9-211ENST00000508546 LOC105371242A0A075B767 164 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 RNF103-CHMP3A0A140T963 221 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 A0A1W2PPM1 405 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 CLDN24A6NM45 220 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 TMEM229AB2RXF0 380 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 AP3D1O14617 1153 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 WNT9BO14905 357 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 PIP5K1BO14986 540 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 SKAP2O75563 359 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-211ENST00000508546 UPK3AO75631 287 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 BCL10O95999 233 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 HPXP02790 462 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 GSNP06396 782 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 OR12D1P0DN82 309 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 NR4A1P22736 598 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 COL8A2P25067 703 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 CRHR1P34998 444 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 CCT5P48643 541 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 UBA52P62987 128 aaKnown RBP8.07□□□□□ -1.12
NEDD9-211ENST00000508546 MYBPC1Q00872 1141 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 FUT5Q11128 374 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 OR7A5Q15622 319 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 XKR7Q5GH72 579 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 CCDC36Q8IYA8 594 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 KRTCAP2Q8N6L1 136 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 XAGE5Q8WWM1 108 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 CNOT9Q92600 299 aaKnown RBP8.07□□□□□ -1.12
NEDD9-211ENST00000508546 GATA5Q9BWX5 397 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-211ENST00000508546 NARFLQ9H6Q4 476 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 NOX3Q9HBY0 568 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF275Q9NSD4 429 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-211ENST00000508546 REV1Q9UBZ9 1251 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 GIMAP2Q9UG22 337 aa8.07□□□□□ -1.12
NEDD9-211ENST00000508546 J3QLI3 93 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 RNASET2O00584 256 aaKnown RBP8.06□□□□□ -1.12
NEDD9-211ENST00000508546 TRIM13O60858 407 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 PEX11AO75192 247 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF432O94892 652 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 ROR2Q01974 943 aaKnown RBP8.06□□□□□ -1.12
NEDD9-211ENST00000508546 GABPB1Q06547 395 aaPredicted RBP8.06□□□□□ -1.12
NEDD9-211ENST00000508546 NPRL3Q12980 569 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 GSTA3Q16772 222 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 MSMPQ1L6U9 139 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 C6orf136Q5SQH8 315 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 IL23RQ5VWK5 629 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 KRT80Q6KB66 452 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 ACSM5Q6NUN0 579 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 NIPAL3Q6P499 406 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 EPHX4Q8IUS5 362 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 C10orf107Q8IVU9 208 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 CLECL1Q8IZS7 167 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 CLEC4FQ8N1N0 589 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 CCDC63Q8NA47 563 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 NANPQ8TBE9 248 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 RAB8BQ92930 207 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 YIPF5Q969M3 257 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 SLC6A7Q99884 636 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 PKP2Q99959 881 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 C1orf50Q9BV19 199 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF416Q9BWM5 594 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 TMPRSS13Q9BYE2 586 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 MRPL37Q9BZE1 423 aaKnown RBP8.06□□□□□ -1.12
NEDD9-211ENST00000508546 NTN4Q9HB63 628 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 CRLF2Q9HC73 371 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 DDX28Q9NUL7 540 aaKnown RBP8.06□□□□□ -1.12
NEDD9-211ENST00000508546 ADPRHL2Q9NX46 363 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 MID2Q9UJV3 735 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 RCE1Q9Y256 329 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 RASD1Q9Y272 281 aa8.06□□□□□ -1.12
NEDD9-211ENST00000508546 EPPK1P58107 5090 aaKnown RBP8.05□□□□□ -1.12
NEDD9-211ENST00000508546 A0A0G2JMP0 313 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 A0A0X1KG70 313 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 PRAMEF27A3QJZ7 478 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF503-AS2A6NEH8 195 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 CFAP73A6NFT4 308 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 AGAP5A6NIR3 686 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 TMEM233B4DJY2 109 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 PPIHO43447 177 aaKnown RBP8.05□□□□□ -1.12
NEDD9-211ENST00000508546 FRS3O43559 492 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 RP2O75695 350 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 MPZL1O95297 269 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 CHRNGP07510 517 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 UQCRBP14927 111 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 CXCR1P25024 350 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms