RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 LRRC75A-AS1Q8N1F1 130 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 POU5F2Q8N7G0 328 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 ZNF611Q8N823 705 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 ZNF417Q8TAU3 575 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 LZICQ8WZA0 190 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 ZNF587Q96SQ5 575 aaPredicted RBP17.51■□□□□ 0.39
SFXN1-209ENST00000508290 MRPL39Q9NYK5 338 aaKnown RBP17.51■□□□□ 0.39
SFXN1-209ENST00000508290 MGAT4BQ9UQ53 548 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 AMDHD2Q9Y303 409 aa17.51■□□□□ 0.39
SFXN1-209ENST00000508290 ZNF587BE7ETH6 402 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 ITGA5P08648 1049 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 THRBP10828 461 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 NQO1P15559 274 aaKnown RBP17.5■□□□□ 0.39
SFXN1-209ENST00000508290 GRPRP30550 384 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 IFNA8P32881 189 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 KDELR2P33947 212 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 CRYBA2P53672 197 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 SEC24CP53992 1094 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 NPTX1Q15818 432 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 TTC33Q6PID6 262 aaPredicted RBP17.5■□□□□ 0.39
SFXN1-209ENST00000508290 KLHL24Q6TFL4 600 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 EPHX4Q8IUS5 362 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 MICU2Q8IYU8 434 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 VANGL1Q8TAA9 524 aaPredicted RBP17.5■□□□□ 0.39
SFXN1-209ENST00000508290 CCL19Q99731 98 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 PRR14Q9BWN1 585 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 MYLK2Q9H1R3 596 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 SH3GLB1Q9Y371 365 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 NOX1Q9Y5S8 564 aa17.5■□□□□ 0.39
SFXN1-209ENST00000508290 CPSF4LA6NMK7 179 aaKnown RBP17.49■□□□□ 0.39
SFXN1-209ENST00000508290 HS3ST1O14792 307 aa17.49■□□□□ 0.39
SFXN1-209ENST00000508290 PTAFRP25105 342 aa17.49■□□□□ 0.39
SFXN1-209ENST00000508290 ALKBH2Q6NS38 261 aa17.49■□□□□ 0.39
SFXN1-209ENST00000508290 NIPAL3Q6P499 406 aa17.49■□□□□ 0.39
SFXN1-209ENST00000508290 SEZ6L2Q6UXD5 910 aa17.49■□□□□ 0.39
SFXN1-209ENST00000508290 CARM1Q86X55 608 aa17.49■□□□□ 0.39
SFXN1-209ENST00000508290 WFDC6Q9BQY6 131 aa17.49■□□□□ 0.39
SFXN1-209ENST00000508290 ZNF426Q9BUY5 554 aa17.49■□□□□ 0.39
SFXN1-209ENST00000508290 B3GAT1Q9P2W7 334 aa17.49■□□□□ 0.39
SFXN1-209ENST00000508290 HTR3EA5X5Y0 456 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 DYNC1I1O14576 645 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 ARHGEF9O43307 516 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 SMPD2O60906 423 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 SLC43A1O75387 559 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 OR5F1O95221 314 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 WNT11O96014 354 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 IGF2P01344 180 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 BGLAPP02818 100 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 DRD4P21917 467 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 RBM34P42696 430 aaKnown RBP17.48■□□□□ 0.39
SFXN1-209ENST00000508290 PUDPQ08623 228 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 LRRC23Q53EV4 343 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-209ENST00000508290 CYBRD1Q53TN4 286 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 SHEQ5VZ18 495 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 C8orf82Q6P1X6 216 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-209ENST00000508290 UEVLDQ8IX04 471 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 SLC15A3Q8IY34 581 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 C10orf53Q8N6V4 93 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 PIK3C3Q8NEB9 887 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 FAM107BQ9H098 131 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 FKRPQ9H9S5 495 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 SLC7A7Q9UM01 511 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 SLC25A15Q9Y619 301 aa17.48■□□□□ 0.39
SFXN1-209ENST00000508290 HOXB1P14653 301 aaPredicted RBP17.47■□□□□ 0.39
SFXN1-209ENST00000508290 SELENOPP49908 381 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 NUDT2P50583 147 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 CLDN17P56750 224 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 PRPS1P60891 318 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 SELENOWP63302 87 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 IL1RL1Q01638 556 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 LIPEQ05469 1076 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 BSPH1Q075Z2 132 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 PMS2P3Q13401 168 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 PXKQ7Z7A4 578 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 TGIF2LYQ8IUE0 185 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 OR4D11Q8NGI4 311 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 TMEM171Q8WVE6 324 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 FBXW5Q969U6 566 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 ALG2Q9H553 416 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 CXorf56Q9H5V9 222 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 SLC17A5Q9NRA2 495 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 CMTM6Q9NX76 183 aa17.47■□□□□ 0.39
SFXN1-209ENST00000508290 RPL36A-HNRNPH2H7BZ11 118 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 CLOCKO15516 846 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 ZNF432O94892 652 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 OR6A2O95222 327 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 SLC7A2P52569 658 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 TAS2R41P59536 307 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 GNGT1P63211 74 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 ZNF74Q16587 644 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 HMBOX1Q6NT76 420 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 TREML1Q86YW5 311 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 RBM45Q8IUH3 476 aaKnown RBP17.46■□□□□ 0.39
SFXN1-209ENST00000508290 P3H2Q8IVL5 708 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 DEPDC4Q8N2C3 294 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 OR5J2Q8NH18 312 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 OR52N5Q8NH56 324 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 MAGEE2Q8TD90 523 aaPredicted RBP17.46■□□□□ 0.39
SFXN1-209ENST00000508290 AKAP1Q92667 903 aaKnown RBP eCLIP17.46■□□□□ 0.39
SFXN1-209ENST00000508290 HS6ST2Q96MM7 605 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms