RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 PITPNBP48739 271 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 EFNA3P52797 238 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 ACTA2P62736 377 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 ACTG2P63267 376 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 C19orf57Q0VDD7 668 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 SKP2Q13309 424 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 TRAM1Q15629 374 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 C14orf28Q4W4Y0 310 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 ALG10Q5BKT4 473 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 CCDC28AQ8IWP9 274 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 MS4A15Q8N5U1 240 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 POMGNT2Q8NAT1 580 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 ZNF285Q96NJ3 590 aa20.08■□□□□ 0.81
SPCS3-203ENST00000507678 RABL2AQ9UBK7 228 aaPredicted RBP20.08■□□□□ 0.81
SPCS3-203ENST00000507678 SC5DO75845 299 aa20.08■□□□□ 0.8
SPCS3-203ENST00000507678 TACR3P29371 465 aa20.08■□□□□ 0.8
SPCS3-203ENST00000507678 NR0B1P51843 470 aaKnown RBP20.08■□□□□ 0.8
SPCS3-203ENST00000507678 HNRNPKP61978 463 aaKnown RBP eCLIP20.08■□□□□ 0.8
SPCS3-203ENST00000507678 SF3A2Q15428 464 aaKnown RBP20.08■□□□□ 0.8
SPCS3-203ENST00000507678 OR14A16Q8NHC5 309 aa20.08■□□□□ 0.8
SPCS3-203ENST00000507678 HSD17B8Q92506 261 aa20.08■□□□□ 0.8
SPCS3-203ENST00000507678 RFT1Q96AA3 541 aa20.08■□□□□ 0.8
SPCS3-203ENST00000507678 ZNF578Q96N58 590 aaPredicted RBP20.08■□□□□ 0.8
SPCS3-203ENST00000507678 ALG12Q9BV10 488 aa20.08■□□□□ 0.8
SPCS3-203ENST00000507678 TTYH1Q9H313 450 aaPredicted RBP20.08■□□□□ 0.8
SPCS3-203ENST00000507678 BLACEA4D250 179 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 TVP23AA6NH52 213 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 PRR32B1ATL7 298 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 NUDT1P36639 197 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 NSDHLQ15738 373 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 TOMM34Q15785 309 aaPredicted RBP20.07■□□□□ 0.8
SPCS3-203ENST00000507678 ZNF74Q16587 644 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 ATG4DQ86TL0 474 aaPredicted RBP20.07■□□□□ 0.8
SPCS3-203ENST00000507678 ZNF433Q8N7K0 673 aaPredicted RBP20.07■□□□□ 0.8
SPCS3-203ENST00000507678 PHF7Q9BWX1 381 aaPredicted RBP20.07■□□□□ 0.8
SPCS3-203ENST00000507678 LMO7DNF2Z398 122 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 GPANK1O95872 356 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 CD3GP09693 182 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 RORAP35398 523 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 AGFG1P52594 562 aaKnown RBP20.07■□□□□ 0.8
SPCS3-203ENST00000507678 EGR4Q05215 589 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 LTBQ06643 244 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.07■□□□□ 0.8
SPCS3-203ENST00000507678 MARCH3Q86UD3 253 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 TPRA1Q86W33 373 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 FOXN4Q96NZ1 517 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 KCNJ15Q99712 375 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 ABCG5Q9H222 651 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 SLA2Q9H6Q3 261 aa20.07■□□□□ 0.8
SPCS3-203ENST00000507678 DCTN6O00399 190 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 FLRT2O43155 660 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 WISP1O95388 367 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 PRPS1P60891 318 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 GPR176Q14439 515 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 TRILQ7L0X0 811 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 SDR16C5Q8N3Y7 309 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 OR1L3Q8NH93 324 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 GRPEL2Q8TAA5 225 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 ZNF671Q8TAW3 534 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 DERL3Q96Q80 235 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 NUDT9Q9BW91 350 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 ARID1BQ8NFD5 2236 aaPredicted RBP20.06■□□□□ 0.8
SPCS3-203ENST00000507678 TMEM72A0PK05 275 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 ANKRD61A6NGH8 418 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 C11orf98E9PRG8 122 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 IL33O95760 270 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 OR8G3PP0DMU2 310 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 IL12BP29460 328 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 PPICP45877 212 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 ODF4Q2M2E3 257 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 CEP76Q8TAP6 659 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 LCORQ96JN0 433 aaPredicted RBP20.06■□□□□ 0.8
SPCS3-203ENST00000507678 LPAR4Q99677 370 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 NOX4Q9NPH5 578 aa20.06■□□□□ 0.8
SPCS3-203ENST00000507678 OR6C70A6NIJ9 312 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 FOLR1P15328 257 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 CD53P19397 219 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 NPR2P20594 1047 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 OR3A3P47888 321 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 RPS11P62280 158 aaKnown RBP eCLIP20.05■□□□□ 0.8
SPCS3-203ENST00000507678 RPS4XP62701 263 aaKnown RBP20.05■□□□□ 0.8
SPCS3-203ENST00000507678 ZSWIM7Q19AV6 140 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 COL13A1Q5TAT6 717 aaPredicted RBP20.05■□□□□ 0.8
SPCS3-203ENST00000507678 C1QL3Q5VWW1 255 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 GALNT9Q9HCQ5 603 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 MMP25Q9NPA2 562 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 TEKT2Q9UIF3 430 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 TP53BP1Q12888 1972 aaPredicted RBP20.05■□□□□ 0.8
SPCS3-203ENST00000507678 TRAV6A0A075B6T7 132 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 OGG1O15527 345 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 GUSBP08236 651 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 NANOS3P60323 173 aaKnown RBP20.05■□□□□ 0.8
SPCS3-203ENST00000507678 CFHR1Q03591 330 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 YIF1BQ5BJH7 314 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 HES5Q5TA89 166 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 FNDC7Q5VTL7 733 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 ZNF440Q8IYI8 595 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 SLC25A36Q96CQ1 311 aa20.05■□□□□ 0.8
SPCS3-203ENST00000507678 TSPAN10Q9H1Z9 355 aaPredicted RBP20.05■□□□□ 0.8
SPCS3-203ENST00000507678 RXFP3Q9NSD7 469 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms