RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 RPL13AP3Q6NVV1 102 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 SHQ1Q6PI26 577 aaKnown RBP17.91■□□□□ 0.46
USP53-203ENST00000507597 XKRXQ6PP77 449 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 SLC46A3Q7Z3Q1 461 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 HDDC2Q7Z4H3 204 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 PXKQ7Z7A4 578 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 GALNT5Q7Z7M9 940 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 UEVLDQ8IX04 471 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 ANKK1Q8NFD2 765 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 OR10G2Q8NGC3 310 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 OR4C15Q8NGM1 316 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 DNAJC9Q8WXX5 260 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 LRTOMTQ8WZ04 291 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 INTS12Q96CB8 462 aaKnown RBP17.91■□□□□ 0.46
USP53-203ENST00000507597 FAM46AQ96IP4 442 aaKnown RBP17.91■□□□□ 0.46
USP53-203ENST00000507597 MOGAT1Q96PD6 335 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 PIGMQ9H3S5 423 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 PDP1Q9P0J1 537 aaPredicted RBP17.91■□□□□ 0.46
USP53-203ENST00000507597 KLHL13Q9P2N7 655 aa17.91■□□□□ 0.46
USP53-203ENST00000507597 RP1L1Q8IWN7 2480 aaPredicted RBP17.9■□□□□ 0.46
USP53-203ENST00000507597 IGKV3D-15A0A087WSY6 115 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 A0A1W2PNV4 684 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 PLPP3O14495 311 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 ZNF23P17027 643 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 FPR3P25089 353 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 CHRNB4P30926 498 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 OMPP47874 163 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 TSPAN31Q12999 210 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 SLC17A1Q14916 467 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 SEC23BQ15437 767 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 ZBED5Q49AG3 693 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 STK32CQ86UX6 486 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 CCDC103Q8IW40 242 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 CNEP1R1Q8N9A8 125 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 OR6K3Q8NGY3 331 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 ABHD3Q8WU67 409 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 CCDC120Q96HB5 630 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 PSD2Q9BQI7 771 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 KIF17Q9P2E2 1029 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 STX18Q9P2W9 335 aaKnown RBP17.9■□□□□ 0.46
USP53-203ENST00000507597 NOSIPQ9Y314 301 aaKnown RBP17.9■□□□□ 0.46
USP53-203ENST00000507597 ESPL1Q14674 2120 aa17.9■□□□□ 0.46
USP53-203ENST00000507597 MED12Q93074 2177 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 A0A1W2PRG6 482 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 UNC119BA6NIH7 251 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 OR6C65A6NJZ3 312 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 LRRN3E7EW58 273 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 G3V2T6 193 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 MRPL33O75394 65 aaKnown RBP17.89■□□□□ 0.45
USP53-203ENST00000507597 ADAP00813 363 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 MAKP20794 623 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 GPR4P46093 362 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 SEM1Q6ZVN7 128 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 ZER1Q7Z7L7 766 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 AQP11Q8NBQ7 271 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 OR9K2Q8NGE7 335 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 DGCR6LQ9BY27 220 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 HIF3AQ9Y2N7 669 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 POLEQ07864 2286 aa17.89■□□□□ 0.45
USP53-203ENST00000507597 AGFG2O95081 481 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 BAG2O95816 211 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 ALG10Q5BKT4 473 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 PGBD2Q6P3X8 592 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 AMIGO2Q86SJ2 522 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 TUSC5Q8IXB3 177 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 GCNT2Q8N0V5 402 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 RPRMLQ8N4K4 120 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 ZNF808Q8N4W9 903 aaPredicted RBP17.88■□□□□ 0.45
USP53-203ENST00000507597 ATG16L2Q8NAA4 619 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 CA5BP1Q8WTZ4 195 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 INIPQ9NRY2 104 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 ENOPH1Q9UHY7 261 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 PROCRQ9UNN8 238 aa17.88■□□□□ 0.45
USP53-203ENST00000507597 FASNP49327 2511 aaKnown RBP17.88■□□□□ 0.45
USP53-203ENST00000507597 A0A0G2JNJ9 132 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 ZNF726A6NNF4 738 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 ZNF716A6NP11 495 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 C11orf98E9PRG8 122 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 MS4A18H0YCH9 400 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 TOXO94900 526 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 NDUFB2O95178 105 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 FUT4P22083 530 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 AGTR1P30556 359 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 RPL4P36578 427 aaKnown RBP17.87■□□□□ 0.45
USP53-203ENST00000507597 GSSP48637 474 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 DAP3P51398 398 aaKnown RBP17.87■□□□□ 0.45
USP53-203ENST00000507597 P2RY4P51582 365 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 PPP1R8Q12972 351 aaKnown RBP17.87■□□□□ 0.45
USP53-203ENST00000507597 MS4A18Q3C1V0 323 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 SLC25A35Q3KQZ1 300 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 CREB3L2Q70SY1 520 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 ZNF100Q8IYN0 542 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 PQLC1Q8N2U9 271 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 MARVELD2Q8N4S9 558 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 LRRC17Q8N6Y2 441 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 ICA1LQ8NDH6 482 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 OR9Q2Q8NGE9 314 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 OR52L1Q8NGH7 329 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 OR51A7Q8NH64 312 aa17.87■□□□□ 0.45
USP53-203ENST00000507597 TMEM45BQ96B21 275 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms