RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 GPR157Q5UAW9 335 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 PRAMEF8Q5VWM4 474 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 PRAMEF7Q5VXH5 474 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 STEAP4Q687X5 459 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 ACSM2BQ68CK6 577 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 TMEM225Q6GV28 225 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 DHRS7BQ6IAN0 325 aaPredicted RBP6.05□□□□□ -1.44
VCAN-207ENST00000507162 RGS7BPQ6MZT1 257 aaPredicted RBP6.05□□□□□ -1.44
VCAN-207ENST00000507162 NIPAL3Q6P499 406 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 CCDC137Q6PK04 289 aaKnown RBP6.05□□□□□ -1.44
VCAN-207ENST00000507162 LRRN1Q6UXK5 716 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 RPS27LQ71UM5 84 aaKnown RBP6.05□□□□□ -1.44
VCAN-207ENST00000507162 CMC1Q7Z7K0 106 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 PDIK1LQ8N165 341 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 POU5F2Q8N7G0 328 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 TMEM99Q8N816 258 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 ICA1LQ8NDH6 482 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 ST8SIA1Q92185 356 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 CDS1Q92903 461 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 R3HDM4Q96D70 268 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 NEURL3Q96EH8 262 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 APIPQ96GX9 242 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 BTBD2Q9BX70 525 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 SHCBP1LQ9BZQ2 653 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 MMP28Q9H239 520 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 OR51B6Q9H340 312 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 CENPHQ9H3R5 247 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 SERHL2Q9H4I8 314 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 NANOGQ9H9S0 305 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 PATZ1Q9HBE1 687 aaKnown RBP6.05□□□□□ -1.44
VCAN-207ENST00000507162 TMEM165Q9HC07 324 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 ACER3Q9NUN7 267 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 NKIRAS2Q9NYR9 191 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 NKX1-2Q9UD57 310 aaPredicted RBP6.05□□□□□ -1.44
VCAN-207ENST00000507162 TRAPPC4Q9Y296 219 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 SIGLEC9Q9Y336 463 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 NPTNQ9Y639 398 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 LYSTQ99698 3801 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 E9PQ18 207 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 PPP6CO00743 305 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 ANKRD28O15084 1053 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 SPRY3O43610 288 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 SCN2BO60939 215 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 AKR7A3O95154 331 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 MT-ND5P03915 603 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 UBTFL6P0CB48 400 aaPredicted RBP6.04□□□□□ -1.44
VCAN-207ENST00000507162 OR8G3PP0DMU2 310 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 IMPDH2P12268 514 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 LYL1P12980 280 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 TYK2P29597 1187 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 LSP1P33241 339 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 PTDSS1P48651 473 aaKnown RBP6.04□□□□□ -1.44
VCAN-207ENST00000507162 KLF3P57682 345 aaPredicted RBP6.04□□□□□ -1.44
VCAN-207ENST00000507162 KRTAP10-11P60412 298 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 EMX1Q04741 257 aaPredicted RBP6.04□□□□□ -1.44
VCAN-207ENST00000507162 PPP1R7Q15435 360 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 FXNQ16595 210 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 NOXRED1Q6NXP6 359 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 GDPGP1Q6ZNW5 385 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 RNF144BQ7Z419 303 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 CMIPQ8IY22 773 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 SPICQ8N5J4 248 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 PTGR2Q8N8N7 351 aaPredicted RBP6.04□□□□□ -1.44
VCAN-207ENST00000507162 SYNPRQ8TBG9 265 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 ADAMTS15Q8TE58 950 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 HOXB13Q92826 284 aaPredicted RBP6.04□□□□□ -1.44
VCAN-207ENST00000507162 GIMAP5Q96F15 307 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 GPR22Q99680 433 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 DESI2Q9BSY9 194 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 CCDC106Q9BWC9 280 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 CNTD2Q9H8S5 307 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 SLCO1C1Q9NYB5 712 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 IL20RAQ9UHF4 553 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 GUCA1BQ9UMX6 200 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 TEX264Q9Y6I9 313 aa6.04□□□□□ -1.44
VCAN-207ENST00000507162 DNAH7Q8WXX0 4024 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 SLC22A23A1A5C7 686 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 SERTM1A2A2V5 107 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 ANKRD61A6NGH8 418 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 MANBAO00462 879 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 DNALI1O14645 258 aaPredicted RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 TSPAN9O75954 239 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 CSTAP01040 98 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 LCKP06239 509 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 DRD4P21917 467 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 FKBP2P26885 142 aaKnown RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 GABRA5P31644 462 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 CLK1P49759 484 aaKnown RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 SH3BGRP55822 239 aaPredicted RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 BPIFB3P59826 476 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 FGF12P61328 243 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 ILF2Q12905 390 aaKnown RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 PDE7AQ13946 482 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 CEACAM7Q14002 265 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 FRG1Q14331 258 aaKnown RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 OR7A5Q15622 319 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 ZKSCAN8Q15776 578 aaPredicted RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 GSG1Q2KHT4 349 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 CEACAM16Q2WEN9 425 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms