RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 NKX6-1P78426 367 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-209ENST00000506630 SLC25A3Q00325 362 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 TTC33Q6PID6 262 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-209ENST00000506630 WDR88Q6ZMY6 472 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 Q6ZT83 130 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 VTCN1Q7Z7D3 282 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 TSPYL5Q86VY4 417 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-209ENST00000506630 PGAM4Q8N0Y7 254 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 FITM2Q8N6M3 262 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 C10orf53Q8N6V4 93 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 RNF148Q8N7C7 305 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 ZNF417Q8TAU3 575 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 KISS1RQ969F8 398 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-209ENST00000506630 SLC41A3Q96GZ6 507 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 ZNF587Q96SQ5 575 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-209ENST00000506630 MDFIQ99750 246 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 TMEM43Q9BTV4 400 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
TCOF1-209ENST00000506630 SF3B5Q9BWJ5 86 aaKnown RBP11.59□□□□□ -0.55
TCOF1-209ENST00000506630 PCDHAC1Q9H158 963 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 SEC14L4Q9UDX3 406 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 EGFL7Q9UHF1 273 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 RASD1Q9Y272 281 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 GPR52Q9Y2T5 361 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 DSCAMO60469 2012 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 A0A1W2PPR1 153 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 GMNNO75496 209 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 LYZL6O75951 148 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 VAMP5O95183 116 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 SERPINA1P01009 418 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 BGLAPP02818 100 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 THY1P04216 161 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 NQO1P15559 274 aaKnown RBP11.58□□□□□ -0.56
TCOF1-209ENST00000506630 PPP3CBP16298 524 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 TCN1P20061 433 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-209ENST00000506630 NTF4P34130 210 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 ITGADQ13349 1161 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 PIN1Q13526 163 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-209ENST00000506630 MFSD13AQ14CX5 517 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 P2RY6Q15077 328 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 SFRP5Q5T4F7 317 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 ALKBH2Q6NS38 261 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 C16orf89Q6UX73 402 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 BHLHA15Q7RTS1 189 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-209ENST00000506630 WFDC8Q8IUA0 241 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 KDM8Q8N371 416 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 STEAP2Q8NFT2 490 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 S100PBPQ96BU1 408 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 MPP4Q96JB8 637 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 HSH2DQ96JZ2 352 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 ZNF385AQ96PM9 386 aaKnown RBP11.58□□□□□ -0.56
TCOF1-209ENST00000506630 ASPNQ9BXN1 380 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 POLR2J2Q9GZM3 115 aaKnown RBP11.58□□□□□ -0.56
TCOF1-209ENST00000506630 POLR2J3Q9H1A7 115 aaKnown RBP11.58□□□□□ -0.56
TCOF1-209ENST00000506630 PLEKHF2Q9H8W4 249 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 BEX4Q9NWD9 120 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-209ENST00000506630 PARPBPQ9NWS1 579 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 NDE1Q9NXR1 346 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 UPB1Q9UBR1 384 aa11.58□□□□□ -0.56
TCOF1-209ENST00000506630 KIAA1324LA8MWY0 1029 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-209ENST00000506630 LRRN3E7EW58 273 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 OR5F1O95221 314 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 LYPD3O95274 346 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 CNOT4O95628 575 aaKnown RBP11.57□□□□□ -0.56
TCOF1-209ENST00000506630 LY6G6DO95868 133 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 ZNF43P17038 809 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 GGT1P19440 569 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 COX5AP20674 150 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 CRYGSP22914 178 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 IGHV1-2P23083 117 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 FAPQ12884 760 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 KRT72Q14CN4 511 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 STK11Q15831 433 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 IFI44LQ53G44 452 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 FBXW9Q5XUX1 488 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 GLYATQ6IB77 296 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 NIPAL3Q6P499 406 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 LINC00114Q6XXX2 140 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 C22orf34Q6ZV56 151 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 FKBP9P1Q75LS8 142 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 CBLL1Q75N03 491 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 AAED1Q7RTV5 226 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 PRIMA1Q86XR5 153 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 DEFB107AQ8IZN7 70 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 FAM156AQ8NDB6 213 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 OR6S1Q8NH40 331 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 GEMIN6Q8WXD5 167 aaKnown RBP11.57□□□□□ -0.56
TCOF1-209ENST00000506630 TMEM45BQ96B21 275 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 PIK3IP1Q96FE7 263 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 PRRC1Q96M27 445 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 MOGAT1Q96PD6 335 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 HDHD5Q9BXW7 423 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 OR10A4Q9H209 315 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 ASB6Q9NWX5 421 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 RIMS3Q9UJD0 308 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 RPS6KA6Q9UK32 745 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 B3GALT5Q9Y2C3 310 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 CORINQ9Y5Q5 1042 aa11.57□□□□□ -0.56
TCOF1-209ENST00000506630 RAI1Q7Z5J4 1906 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-209ENST00000506630 CADP27708 2225 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms