RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 TMUB1Q9BVT8 246 aa13.7□□□□□ -0.22
CLDND1-211ENST00000506575 ASPNQ9BXN1 380 aa13.7□□□□□ -0.22
CLDND1-211ENST00000506575 SEC14L4Q9UDX3 406 aa13.7□□□□□ -0.22
CLDND1-211ENST00000506575 B3GALT5Q9Y2C3 310 aa13.7□□□□□ -0.22
CLDND1-211ENST00000506575 A0A1W2PR80 420 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 ZNF587BE7ETH6 402 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 PDLIM1O00151 329 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 CHP2O43745 196 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 IFNA14P01570 189 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 CDH2P19022 906 aaPredicted RBP13.69□□□□□ -0.22
CLDND1-211ENST00000506575 PTNP21246 168 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 SELENOPP49908 381 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 ZNF83P51522 516 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 CLDN17P56750 224 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 FOXD4Q12950 439 aaPredicted RBP13.69□□□□□ -0.22
CLDND1-211ENST00000506575 VEZF1Q14119 521 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 ZNF672Q499Z4 452 aaPredicted RBP13.69□□□□□ -0.22
CLDND1-211ENST00000506575 ENTPD8Q5MY95 495 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 KLHL24Q6TFL4 600 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 CALHM3Q86XJ0 350 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 POU5F2Q8N7G0 328 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 ADPRHL1Q8NDY3 354 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 WFDC11Q8NEX6 87 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 KBTBD8Q8NFY9 601 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 OR6S1Q8NH40 331 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 RCN3Q96D15 328 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 PERPQ96FX8 193 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 TMEM43Q9BTV4 400 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 AMBRA1Q9C0C7 1298 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 CXorf56Q9H5V9 222 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 SLC17A5Q9NRA2 495 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 NPAP1Q9NZP6 1156 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 BAG5Q9UL15 447 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 AMDHD2Q9Y303 409 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 CORINQ9Y5Q5 1042 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 SLC25A15Q9Y619 301 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 VPS13CQ709C8 3753 aa13.69□□□□□ -0.22
CLDND1-211ENST00000506575 ABCD4O14678 606 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 AKAP8O43823 692 aaKnown RBP13.68□□□□□ -0.22
CLDND1-211ENST00000506575 TMCC2O75069 709 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 FZD7O75084 574 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 SLC43A1O75387 559 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 WNT11O96014 354 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 COX4I1P13073 169 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 NPTX1Q15818 432 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 Q5PR19 223 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 SPATA21Q7Z572 469 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 RBM45Q8IUH3 476 aaKnown RBP13.68□□□□□ -0.22
CLDND1-211ENST00000506575 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
CLDND1-211ENST00000506575 LILRB1Q8NHL6 650 aaPredicted RBP13.68□□□□□ -0.22
CLDND1-211ENST00000506575 ADAMTS16Q8TE57 1224 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 RADILQ96JH8 1075 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 ZNF583Q96ND8 569 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 MGAT4BQ9UQ53 548 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 LAMP3Q9UQV4 416 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 RCE1Q9Y256 329 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 AP3M1Q9Y2T2 418 aa13.68□□□□□ -0.22
CLDND1-211ENST00000506575 MAGED1Q9Y5V3 778 aaPredicted RBP13.68□□□□□ -0.22
CLDND1-211ENST00000506575 HEATR1Q9H583 2144 aaKnown RBP13.67□□□□□ -0.22
CLDND1-211ENST00000506575 PLCE1Q9P212 2302 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 TRAPPC13A5PLN9 417 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 FAM220BPB1ANY3 271 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 M0R1B8 84 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 BGLAPP02818 100 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 PTAFRP25105 342 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 CDH11P55287 796 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 PRPS1P60891 318 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 RPS4XP62701 263 aaKnown RBP13.67□□□□□ -0.22
CLDND1-211ENST00000506575 PMS2P3Q13401 168 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 C1QTNF12Q5T7M4 302 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 HMBOX1Q6NT76 420 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 TTC33Q6PID6 262 aaPredicted RBP13.67□□□□□ -0.22
CLDND1-211ENST00000506575 ARPINQ7Z6K5 226 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 UEVLDQ8IX04 471 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 DEPDC4Q8N2C3 294 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 SCAIQ8N9R8 606 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 OR2T12Q8NG77 320 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 OR4D11Q8NGI4 311 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 SMAP2Q8WU79 429 aaPredicted RBP13.67□□□□□ -0.22
CLDND1-211ENST00000506575 NEUROG1Q92886 237 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 MPP4Q96JB8 637 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 ALKBH3Q96Q83 286 aaPredicted RBP13.67□□□□□ -0.22
CLDND1-211ENST00000506575 ELAC2Q9BQ52 826 aaKnown RBP13.67□□□□□ -0.22
CLDND1-211ENST00000506575 C1QTNF6Q9BXI9 259 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 LINC00470Q9BZP3 86 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 B3GAT1Q9P2W7 334 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 POU2F3Q9UKI9 436 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 SLC7A7Q9UM01 511 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 USP22Q9UPT9 525 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 SH3GLB1Q9Y371 365 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 USF3Q68DE3 2245 aa13.67□□□□□ -0.22
CLDND1-211ENST00000506575 ZNF469Q96JG9 3925 aaPredicted RBP13.66□□□□□ -0.22
CLDND1-211ENST00000506575 LOC102725191A0A1B0GVB3 256 aa13.66□□□□□ -0.22
CLDND1-211ENST00000506575 UPK3AO75631 287 aa13.66□□□□□ -0.22
CLDND1-211ENST00000506575 MT-ATP6P00846 226 aa13.66□□□□□ -0.22
CLDND1-211ENST00000506575 PTH2RP49190 550 aa13.66□□□□□ -0.22
CLDND1-211ENST00000506575 CRYBA2P53672 197 aa13.66□□□□□ -0.22
CLDND1-211ENST00000506575 LGALS3BPQ08380 585 aa13.66□□□□□ -0.22
CLDND1-211ENST00000506575 LRRC23Q53EV4 343 aaPredicted RBP13.66□□□□□ -0.22
CLDND1-211ENST00000506575 HIKESHIQ53FT3 197 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms