RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 RAB33BQ9H082 229 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FZD3Q9NPG1 666 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 NRIP3Q9NQ35 241 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 NLE1Q9NVX2 485 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 STRAPQ9Y3F4 350 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 YLPM1P49750 1951 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TRAV8-7A0A075B6U6 113 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ANKRD61A6NGH8 418 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 HMSDA8MTL9 139 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 D6RAR5 112 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 H7C1Q1 480 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CCSO14618 274 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 EMC8O43402 210 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 RPLP2P05387 115 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 HOXB9P17482 250 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 APEX1P27695 318 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 LCN1P31025 176 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CLDN18P56856 261 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SESN2P58004 480 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ZXDBP98169 803 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 REEP5Q00765 189 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SLC25A11Q02978 314 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ILF3Q12906 894 aaKnown RBP eCLIP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 RPA4Q13156 261 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 HEPACAMQ14CZ8 416 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 IDNKQ5T6J7 187 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PLPP4Q5VZY2 271 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 EIF3MQ7L2H7 374 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FAM214BQ7L5A3 538 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TSPAN33Q86UF1 283 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 WDSUB1Q8N9V3 476 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FIBINQ8TAL6 211 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MAPK15Q8TD08 544 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CXorf40AQ8TE69 158 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SLAMF9Q96A28 289 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PACRGQ96M98 296 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MGME1Q9BQP7 344 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 GPR87Q9BY21 358 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SLC38A1Q9H2H9 487 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PLK3Q9H4B4 646 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 LANCL2Q9NS86 450 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 RAB20Q9NX57 234 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FBXL17Q9UF56 701 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 UBQLN2Q9UHD9 624 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 IKZF3Q9UKT9 509 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ZFP30Q9Y2G7 519 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 OAS3Q9Y6K5 1087 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 A0A1B0GUH1 482 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TRAPPC13A5PLN9 417 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PRAMEF26H0Y7S4 382 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SLC1A7O00341 560 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FABP7O15540 132 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MBTPS2O43462 519 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SIX3O95343 332 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TACR2P21452 398 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 DTYMKP23919 212 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MYL9P24844 172 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SSTR1P30872 391 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 NCS1P62166 190 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CCL7P80098 99 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PCOLCEQ15113 449 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CALCRLQ16602 461 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 UPP1Q16831 310 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM241Q24JQ0 296 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FAM182AQ5T1J6 154 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM244Q5VVB8 128 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ANKRD54Q6NXT1 300 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 RSPO2Q6UXX9 243 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 UNC93AQ86WB7 457 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SPICQ8N5J4 248 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF655Q8N720 491 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 OR10H5Q8NGA6 315 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 OR4A4PQ8NGN8 299 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MYLIPQ8WY64 445 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ADGRG7Q96K78 797 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 COPS4Q9BT78 406 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CDT1Q9H211 546 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 VAPAQ9P0L0 249 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 THAP10Q9P2Z0 257 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FBXL2Q9UKC9 423 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PRORSD1PA6NEY8 169 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FABP12A6NFH5 140 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 VCYO14598 125 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 IMPA2O14732 288 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PLIN3O60664 434 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 GPANK1O95872 356 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TGFAP01135 160 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FURINP09958 794 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 NAA10P41227 235 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 RAB25P57735 213 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 YPEL3P61236 119 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 OGDHQ02218 1023 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 OVGP1Q12889 678 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PRPSAP1Q14558 356 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SLC17A1Q14916 467 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 JOSD1Q15040 202 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 OR8G1Q15617 311 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MPPED2Q15777 294 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 C2orf76Q3KRA6 126 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 GSG1LQ6UXU4 331 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms