RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 POLE3Q9NRF9 147 aa9.9□□□□□ -0.82
CCHCR1-219ENST00000505392 MYEF2Q9P2K5 600 aaKnown RBP9.9□□□□□ -0.82
CCHCR1-219ENST00000505392 DUSP13Q9UII6 198 aa9.9□□□□□ -0.82
CCHCR1-219ENST00000505392 ZDHHC2Q9UIJ5 367 aa9.9□□□□□ -0.82
CCHCR1-219ENST00000505392 NUP214P35658 2090 aaPredicted RBP9.9□□□□□ -0.82
CCHCR1-219ENST00000505392 RNF103-CHMP3A0A140T963 221 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 DEAF1O75398 565 aaPredicted RBP9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 NCR1O76036 304 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 AGR2O95994 175 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 PROCP04070 461 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 CHRM4P08173 479 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 ZNF35P13682 527 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 CPA3P15088 417 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 MAGEB1P43366 347 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 CLDN17P56750 224 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 BNIP2Q12982 314 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 OCLNQ16625 522 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 CEACAM16Q2WEN9 425 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 PGS1Q32NB8 556 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 TRMT5Q32P41 509 aaKnown RBP9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 ALKBH6Q3KRA9 238 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 UGT3A2Q3SY77 523 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 GLIPR1L2Q4G1C9 344 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 GPAT3Q53EU6 434 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 GKAP1Q5VSY0 366 aaPredicted RBP9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 IL23RQ5VWK5 629 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 KANK2Q63ZY3 851 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 TNFAIP8L2Q6P589 184 aaPredicted RBP9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 ZCCHC23Q6ZST2 131 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 TREML1Q86YW5 311 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 CCDC36Q8IYA8 594 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 GSPT2Q8IYD1 628 aaKnown RBP9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 CLECL1Q8IZS7 167 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 CCDC63Q8NA47 563 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 ANKK1Q8NFD2 765 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 RAB39BQ96DA2 213 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 MS4A3Q96HJ5 214 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 PPP3R2Q96LZ3 170 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 FMO2Q99518 471 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 C1orf50Q9BV19 199 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 SLITRK2Q9H156 845 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 GPR35Q9HC97 309 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 OPN4Q9UHM6 478 aa9.89□□□□□ -0.83
CCHCR1-219ENST00000505392 A0A1W2PPM1 405 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 CFAP73A6NFT4 308 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 DNAJC9-AS1A6NH13 148 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 GLRA3O75311 464 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 SEC14L2O76054 403 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 ZNF432O94892 652 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 FSHBP01225 129 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 HLA-HP01893 362 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 CD79AP11912 226 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 PRPS1L1P21108 318 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 GATA3P23771 443 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 CASQ1P31415 396 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 RAD52P43351 418 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 PIGFQ07326 219 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 FUT5Q11128 374 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 BAMBIQ13145 260 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 GSTA3Q16772 222 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 CCDC153Q494R4 210 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 PRAMEF8Q5VWM4 474 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 PRAMEF7Q5VXH5 474 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 DOK3Q7L591 496 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 RIMKLAQ8IXN7 391 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 GPR137CQ8N3F9 429 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 KIF18AQ8NI77 898 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 MIPOL1Q8TD10 442 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 TWIST2Q8WVJ9 160 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 ZNF385DQ9H6B1 395 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 B3GNT2Q9NY97 397 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 TBK1Q9UHD2 729 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 RASD1Q9Y272 281 aa9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 PRKDCP78527 4128 aaKnown RBP9.88□□□□□ -0.83
CCHCR1-219ENST00000505392 A0A1W2PPW3 197 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 PRAMEF27A3QJZ7 478 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 A8MVM7 634 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 TMEM233B4DJY2 109 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 FAAHO00519 579 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 PLIN3O60664 434 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 SLC43A1O75387 559 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 IGHV2-5P01817 119 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 FGF4P08620 206 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 UQCRBP14927 111 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 ZNF43P17038 809 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 MDKP21741 143 aaPredicted RBP9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 CCT5P48643 541 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 CCL8P80075 99 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 GALK2Q01415 458 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 EPS8Q12929 822 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 GSG1Q2KHT4 349 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 C6orf136Q5SQH8 315 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 OR4F3Q6IEY1 312 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 CMIPQ8IY22 773 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 FNDC5Q8NAU1 212 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 SLC25A36Q96CQ1 311 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 C1orf147Q96MC9 270 aaPredicted RBP9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 GPA33Q99795 319 aa9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 GATA5Q9BWX5 397 aaPredicted RBP9.87□□□□□ -0.83
CCHCR1-219ENST00000505392 ZNF346Q9UL40 294 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms